Gene Plut_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_0172 
Symbol 
ID3746281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp177744 
End bp179231 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content63% 
IMG OID637768211 
Productpolysaccharide efflux transporter, putative 
Protein accessionYP_374105 
Protein GI78186062 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.377433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAGAA GTCTTGCGAT AGCTGCTGGC GCGGGGTTCT CTTTTGGCGG ATACATCATC 
GGTCAGGCGG TTCGTTTCAT GTTCAGTCTT GCTGTGGCCC GTCTGCTCGG CGCCGATGCT
CTCGGAACCT ATGCGCTCGC GATGGCCGTG ATTCAGATTG CCGAGGTGGC GGCTCTCGCC
GGCCTGGATT CTGCTCTGCT CCGTTTTTCG GGCATGCACC GTAATGATCC CGTCCGGAGG
CGCCGGCTCA TCGGATTTGT GCTGAAAACC GGGTTCTTCC TCTCCCTTGC GGTCATGCTG
CTGCTTGAGC TCCTTGCCGG CAGCCTTGCC GGTATGCTCA ACGGCGGCAG GATGCTCCAG
CTGGCCATCG CCTGCTATGC TGCTGCGGTG CCGTTCAATG CCGCCACCAT GCTCTACGGT
CACGCCATGC AGGCGGCGGG GCGCATAGAG CCGAAAATCA TCGCCACCCA GGTGCTGAGC
CCTCTGCTGC TCCTCTCTTT CACGTTGCTC CTCAACGCCT CCTCAGGACG GGAGGCTGCA
CTGCTCTTTC CCTTCGCCCT CTCGGCAGCT TCGGCGTTTT TCTGGATCAG GCCCCGGCTC
AGCGACCTTA CCGGGATGGA GCCGGGAGAC TGGCGCAGGG CACCGTTCGA ACGCTCTGTC
CTCTCATATG CGATGCCGTT TCTTCTTGTG TCGCTGCTCA GCATGACAGC CCACTGGCTT
GATATTGTCA TGCTCGGTAT GCTGACAGAT CCCGGGACGG TGGGTCTCTA CCACCCCGCG
GCACGGACCG CCGGCCTCAT CAGGGCTGTG CTTCCGGCCT TTGCCGGTAT GGCGGCGCCG
ATGTTCGCAG AACTCCATGC GGCAGGGAGT ACAGGCGAAC TGGAACGCAT GTACCAGCTC
GTCACGCGCT GGATGGTGAC GGTTGTCGTG CCGCCGGTTC TGCTGTTCCT GCTGTTTCCC
GCTCCGGTGC TCTCTGTGTT CGGAGCACAT TTCACCAAGG CAGCACCCGT GCTCGGGCTG
CTGACGGCGG GGGCATTCCT CCAGGCGCTG TTCGGGATCT CCGCTACGCT GCTCGCCATG
GCCGGGCACT CCCGCCTCAG CCTCCTGAAT GCACTTTCAG CCCTGACCCT GCAGGTCGCG
CTGAACCTTC TCCTGATCCC CCGGATGGGG ATCGAGGGCG CAGCCTCTGC CGGCCTCATA
GTATTCGGCG TGCTGGCTCT GGCGAGGCTT GTCGAGGTCC GCCTGCTCCT CGGCCTGCAC
CCATTTTCCC GTCCCCTCCT GAAGCCGTTT GTCGCGGGGT CGGCCGCGGG CATGCTGCTT
ATCATTAGTC GCGGGTGGCT CCTGACGCTG CCCTTTCCCG CACTTCTTGC CGTTGCCGCA
GGGGCCGCAG TTGCAGTCTA TATGGGGGTT TTGCTGATTC TCGGGTTGGA AGAGGAGGAC
CGGGAGATTA TTTTACGTGC AGGTTTCCTC ATCGGGAGGG GCCGCTGA
 
Protein sequence
MSRSLAIAAG AGFSFGGYII GQAVRFMFSL AVARLLGADA LGTYALAMAV IQIAEVAALA 
GLDSALLRFS GMHRNDPVRR RRLIGFVLKT GFFLSLAVML LLELLAGSLA GMLNGGRMLQ
LAIACYAAAV PFNAATMLYG HAMQAAGRIE PKIIATQVLS PLLLLSFTLL LNASSGREAA
LLFPFALSAA SAFFWIRPRL SDLTGMEPGD WRRAPFERSV LSYAMPFLLV SLLSMTAHWL
DIVMLGMLTD PGTVGLYHPA ARTAGLIRAV LPAFAGMAAP MFAELHAAGS TGELERMYQL
VTRWMVTVVV PPVLLFLLFP APVLSVFGAH FTKAAPVLGL LTAGAFLQAL FGISATLLAM
AGHSRLSLLN ALSALTLQVA LNLLLIPRMG IEGAASAGLI VFGVLALARL VEVRLLLGLH
PFSRPLLKPF VAGSAAGMLL IISRGWLLTL PFPALLAVAA GAAVAVYMGV LLILGLEEED
REIILRAGFL IGRGR