Gene Bcep18194_B3019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_B3019 
Symbol 
ID3754786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007511 
Strand
Start bp3410833 
End bp3411933 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content66% 
IMG OID637767866 
Productouter membrane protein (porin) 
Protein accessionYP_373773 
Protein GI78063865 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.38657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCCTGTTCGC GCTGCCGCTC GCCGCGGCCG CCACCGCCCA CGCGCAAAGC 
AGCGTCACGC TGTACGGCAT CGTCGAAGAC GGTGTCGACT ACGTATCGAA CGTGCAGGGC
AAGCATCTCG TGCAGCTCGC GTCGGGTGTG ACTGCCGGCA GCCGCTGGGG TGTGCGCGGC
ACCGAGGATC TCGGCGGCGG CCTGAGCGCG ATCTTCCGGC TCGAAAGCGG CTTCGACATC
AACTCCGGCC GCCTCGGCAG CGGGCTCGCG TTCTCGCGCA ATGCGTACGT CGGGCTGAAC
GATACGAAGC TCGGCACGCT CACGCTCGGC CGCCAGTGGG ATTCGATCGT TGACTATGTC
GAGCCGTTCA CGCTGAACGG CAACATCGGC GGCTACTACT TCGCGCACCC GAACGACATG
GACAACACCG ACAACGGCTT CCCGATCTCG AACGCGGTGA AGTACCGCAG CCCGACGATC
GCGGGCATCA CGTTCGGCGG CCTCTACGCG TTCGGCGGGC AGCCCGGCCG CTTCTCGGAC
AACGCGACGT TCAGCGTCGG CGCGAGCTAC GCGGCAGGCC CGGTCGGCTT CGGTATCGGC
TATCTGCGGA TCAACAACCC GGGCGTGTCG ACGCAGGGCT ACCAGAACTA TCCGGGCTTC
ACGAATGCGA TCTACGGCAA CTACCTCGAT GCGGCGCGTG CACAGAAGGT GTTCGGCGTG
GGCGCGTCGT ACCAGGTCGT GCAGTGGCTC AAGGTGCTGG CCGACTTCAC GAACACGAAC
TTCCAGCAAG GCAGCGCGGG GCACGACGCG ACATTCCAGA ACTACGAGCT GTCGACGCTG
GTCACGCCGA CGCCGGCCGT GACGATCGGC GCGGGCTATA CGTACACGAC GGGCCGCGAC
CACGCGACGA ATGCGGAGCC GAAGTATCAC CAGTTCAACC TGAGCGTCGA ATACGCGTTG
TCCAAGCGCA CGAGCGTCTA CGTGATGGGC GCGTTCCAGA AAGCGGGCGG CGACGCGCCG
GTCGCGCAGA TCGCGGGTTT CAACCCGTCG GGCAACCAGA AACAGGCGGT GGGCCGCGCG
GGTATCCGCC ACGCGTTCTG A
 
Protein sequence
MKKILFALPL AAAATAHAQS SVTLYGIVED GVDYVSNVQG KHLVQLASGV TAGSRWGVRG 
TEDLGGGLSA IFRLESGFDI NSGRLGSGLA FSRNAYVGLN DTKLGTLTLG RQWDSIVDYV
EPFTLNGNIG GYYFAHPNDM DNTDNGFPIS NAVKYRSPTI AGITFGGLYA FGGQPGRFSD
NATFSVGASY AAGPVGFGIG YLRINNPGVS TQGYQNYPGF TNAIYGNYLD AARAQKVFGV
GASYQVVQWL KVLADFTNTN FQQGSAGHDA TFQNYELSTL VTPTPAVTIG AGYTYTTGRD
HATNAEPKYH QFNLSVEYAL SKRTSVYVMG AFQKAGGDAP VAQIAGFNPS GNQKQAVGRA
GIRHAF