Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_B3019 |
Symbol | |
ID | 3754786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007511 |
Strand | + |
Start bp | 3410833 |
End bp | 3411933 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637767866 |
Product | outer membrane protein (porin) |
Protein accession | YP_373773 |
Protein GI | 78063865 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.38657 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TCCTGTTCGC GCTGCCGCTC GCCGCGGCCG CCACCGCCCA CGCGCAAAGC AGCGTCACGC TGTACGGCAT CGTCGAAGAC GGTGTCGACT ACGTATCGAA CGTGCAGGGC AAGCATCTCG TGCAGCTCGC GTCGGGTGTG ACTGCCGGCA GCCGCTGGGG TGTGCGCGGC ACCGAGGATC TCGGCGGCGG CCTGAGCGCG ATCTTCCGGC TCGAAAGCGG CTTCGACATC AACTCCGGCC GCCTCGGCAG CGGGCTCGCG TTCTCGCGCA ATGCGTACGT CGGGCTGAAC GATACGAAGC TCGGCACGCT CACGCTCGGC CGCCAGTGGG ATTCGATCGT TGACTATGTC GAGCCGTTCA CGCTGAACGG CAACATCGGC GGCTACTACT TCGCGCACCC GAACGACATG GACAACACCG ACAACGGCTT CCCGATCTCG AACGCGGTGA AGTACCGCAG CCCGACGATC GCGGGCATCA CGTTCGGCGG CCTCTACGCG TTCGGCGGGC AGCCCGGCCG CTTCTCGGAC AACGCGACGT TCAGCGTCGG CGCGAGCTAC GCGGCAGGCC CGGTCGGCTT CGGTATCGGC TATCTGCGGA TCAACAACCC GGGCGTGTCG ACGCAGGGCT ACCAGAACTA TCCGGGCTTC ACGAATGCGA TCTACGGCAA CTACCTCGAT GCGGCGCGTG CACAGAAGGT GTTCGGCGTG GGCGCGTCGT ACCAGGTCGT GCAGTGGCTC AAGGTGCTGG CCGACTTCAC GAACACGAAC TTCCAGCAAG GCAGCGCGGG GCACGACGCG ACATTCCAGA ACTACGAGCT GTCGACGCTG GTCACGCCGA CGCCGGCCGT GACGATCGGC GCGGGCTATA CGTACACGAC GGGCCGCGAC CACGCGACGA ATGCGGAGCC GAAGTATCAC CAGTTCAACC TGAGCGTCGA ATACGCGTTG TCCAAGCGCA CGAGCGTCTA CGTGATGGGC GCGTTCCAGA AAGCGGGCGG CGACGCGCCG GTCGCGCAGA TCGCGGGTTT CAACCCGTCG GGCAACCAGA AACAGGCGGT GGGCCGCGCG GGTATCCGCC ACGCGTTCTG A
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Protein sequence | MKKILFALPL AAAATAHAQS SVTLYGIVED GVDYVSNVQG KHLVQLASGV TAGSRWGVRG TEDLGGGLSA IFRLESGFDI NSGRLGSGLA FSRNAYVGLN DTKLGTLTLG RQWDSIVDYV EPFTLNGNIG GYYFAHPNDM DNTDNGFPIS NAVKYRSPTI AGITFGGLYA FGGQPGRFSD NATFSVGASY AAGPVGFGIG YLRINNPGVS TQGYQNYPGF TNAIYGNYLD AARAQKVFGV GASYQVVQWL KVLADFTNTN FQQGSAGHDA TFQNYELSTL VTPTPAVTIG AGYTYTTGRD HATNAEPKYH QFNLSVEYAL SKRTSVYVMG AFQKAGGDAP VAQIAGFNPS GNQKQAVGRA GIRHAF
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