| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B3017 |
|---|
| Symbol | |
|---|
| ID | 3754784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | + |
|---|
| Start bp | 3407690 |
|---|
| End bp | 3409012 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637767864 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_373771 |
|---|
| Protein GI | 78063863 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.615257 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCAAA CCGCGGTTCC CCTCGACACG GCCGACGCCG TGTCGCCCCC TACCTCGAGT
GCCGGGCGCG CGATCGCCGC GGCGTCGATC GGCAACGCGC TGGAGTGGTA CGACTTTTCC
GTCTACGCAT TCTTTGCCGT GTACATCGCG CAGAACTTCT TCCATCGCGG CGACACGGGC
ACCGAGCTGG TCGAGGCGTT CATGGCGTTC GGGATCGGCT TCATCGCGCG GCCGCTCGGC
GCGCTCGCGA TCGGCGTGTA TGGCGATCGC GCGGGCCGCA AGGCCGCGCT AACGCTGACC
ATCCTCGTGA TGGCGGCCGG CACCGGCATC ATCGCGTTCG CGCCGCCGTA CACGGCGATC
GGCGTCGGCG CGCCGCTGCT GATCCTGTGC GGCCGCCTGC TGCAGGGCTT CTCGGCCGGC
GGCGAAGTGG GCGGCGCCGC TGCGTTCCTG ATCGAGCACG CGCCGGCGGA CAAGAAGGGC
CGCTACGCGT CGTGGCTGCA GGCGAGCATG GCCGCGTCGA ACATCCTCGG CGCGCTGGTC
GCGACCGGCG TGACGCTCAC GCTGTCGCGC GAACAGATCG GCGACTGGGG CTGGCGGATC
CCGTTCATCC TCGGCCTCGC GATCGCGCCG GTCGGCCTGT GGCTGCGCAA GACGCTCGAC
GAAACGCCGC ATTTCCGCGC GGAGATGGCG CGTGCCGCGC ATGCGCCGGC CGAACGCAAG
GCGCCGCTGC TGCAGGTCGT GCGCGACTAT CCGCGTGCGC TCGTGGTCGG CACCGGGTTC
TCGGTGTTGT GGGCCGTATG TGTGTATGCG CTGGTGATCT ACATGCCGAC GCACGTGCAG
CGCGCGCTGC ATTTCGACGG GCGCGACGCG TTCATCGCGT CGCTGGTCGG CAACTGCCTG
ATGGCCGTCA CCTGCGTGTG CGCCGGGAGC TGGTCCGACC GTTTCGGCCG GCGCAAGGTG
CTGACGGCCG GCGCCGTGCT GATGCTCGTG TCGGTGTATC CGCTGCTGCA CTGGCTCGCC
GACGTGCACA CGCTCGCCGC GCTGATCGTC GTGCAGAGCG CGTTCTGCGT GATGGTCGCG
ATCTTCACGG GCGTCGCGCC CGCCGCGCTG TCGGAGCTGT TCCCGACCCA GGTGCGCGCG
ACCGGCATGT CGCTGTCCTA CAACATCGCC ACGACGATCT TCGGCGGCTT CGCCCCGGCG
ATCCTCGCGT GGCTCACGCA ACGGTCCGGC AACCCGTTCG CGCCCGCCTG GTATGTGATG
GTCGCGAGCG TCATCGCGCT CGCGTCGATC GCCGCGCTGT CTTCCACGTC ACGTCACGCC
TGA
|
|---|
| Protein sequence | MKQTAVPLDT ADAVSPPTSS AGRAIAAASI GNALEWYDFS VYAFFAVYIA QNFFHRGDTG
TELVEAFMAF GIGFIARPLG ALAIGVYGDR AGRKAALTLT ILVMAAGTGI IAFAPPYTAI
GVGAPLLILC GRLLQGFSAG GEVGGAAAFL IEHAPADKKG RYASWLQASM AASNILGALV
ATGVTLTLSR EQIGDWGWRI PFILGLAIAP VGLWLRKTLD ETPHFRAEMA RAAHAPAERK
APLLQVVRDY PRALVVGTGF SVLWAVCVYA LVIYMPTHVQ RALHFDGRDA FIASLVGNCL
MAVTCVCAGS WSDRFGRRKV LTAGAVLMLV SVYPLLHWLA DVHTLAALIV VQSAFCVMVA
IFTGVAPAAL SELFPTQVRA TGMSLSYNIA TTIFGGFAPA ILAWLTQRSG NPFAPAWYVM
VASVIALASI AALSSTSRHA
|
|---|
| |