| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B2911 |
|---|
| Symbol | |
|---|
| ID | 3754678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 3293587 |
|---|
| End bp | 3294939 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637767759 |
|---|
| Product | pyridoxal-dependent decarboxylase |
|---|
| Protein accession | YP_373666 |
|---|
| Protein GI | 78063758 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAAC TTGCATTGCT GGCCGACGCC GACCGGCGCG CGCACGCGTA TCTGGCCGCG
ACGAACGAGC GGCGTGCGTT TCCCGACGCG GCCGCACTGG CCGGCCTTGC GGCGTTCGAC
GAGCCGCTGC CCGACACGGG CCGCCCGGCC GACGACGTGC TGCGCCTGCT CGACGAGCAC
GGCACGCCCG CGACCGTCGC GTCGAACGGA CCGAACTACT TCGGCTTCGT GATCGGCGCC
GCGTTGCCGG CGGCGGCGGC GGCCGAGCGG CTGATGCTCG CGTGGGACCA GTGCGCGTCG
TCGTATGCGA ATTCACCGGT GGCCGCGACG ATCGAGCGCC AGGCCGCGCG CTGGGTCGTC
GACGTGCTCG GGTTGCCTGA AGGCAGCGCG GTCGGTTTCG GCACGAGCGC GACGGCCTGC
ACGCTCGTCG CGCTGGTGGC CGCGCGGCGC GCGCTGCTCG CCCGCAAGGG CTGGGACGTC
GACGCGGACG GCCTGATCGG CGCACCTGAA GTGAAGGTCG TGATCTCCGA GCTTGCGCAC
ATCACGGTGA AGAAGGCGCT GCGCGTGCTC GGTTTCGGGA TGAAGCGCCT CATCATCGCG
CCGGTCGACA CGCACGGCCG CATCGACCCG GCGCAATTGC CGCCGCTCGA CGACATGACG
ATCCTTTGCG TGCAGGCGGG CGAAGTGAAC ACCGGCGAGT TCGATCCGTT CGCGGCGCTG
ATTCCGCCCG CGAAGGCGGC CGGTGCGTGG GTGCACGTCG ACGGCGCGTT CGGCCTGTGG
GCCCGCGCGT CGTCGAAGCG CGTGCTGACG GACGGCATCG ACGGCGCAGA CAGCTGGACG
ACCGACGGCC ACAAGTGGCT CAACACGCCG TACGACGGCG CGATGGTGAT CTGCCGCGAC
GCGGCCGCGC TCGCGACCGC GATGAACAGC GATGCCGTCT ACCTGAGCGG CGCACAGGAC
GCGCAGAAGA ACCTGAACCT CGAGTTCTCG CGGCGCGCGC GCGGCATCCC CGTGTGGGCC
GCGCTGCGTT CGCTCGGCCG CGCCGGCGTC GCCACGATGG TCGAGCAGCA TTGCGCGCAG
GCGGCGCGAG TCGCGGACGG GCTGCGTGCC GCCGGCTACG ACGTGCTGAA CCGCGTCGTG
CTGAACCAGG TGCTCGTGCG CGCCGGCACC GACGATGAAA CGGCGGCGAT CCTCGCGGCC
GCGCAGGCGT CGGGCGACGT GTGGTTCGGC GCGACGGTGT GGCAAGGGCG GCCGGCGTTC
CGGATCAGCG TGTCGTCGTG GCGCACCGAA GACGCGCACA TCGATCGTCT CGTGGCCTTG
CTGACGAAAC TGCGCGGCGT GCACGTGCGT TGA
|
|---|
| Protein sequence | MDELALLADA DRRAHAYLAA TNERRAFPDA AALAGLAAFD EPLPDTGRPA DDVLRLLDEH
GTPATVASNG PNYFGFVIGA ALPAAAAAER LMLAWDQCAS SYANSPVAAT IERQAARWVV
DVLGLPEGSA VGFGTSATAC TLVALVAARR ALLARKGWDV DADGLIGAPE VKVVISELAH
ITVKKALRVL GFGMKRLIIA PVDTHGRIDP AQLPPLDDMT ILCVQAGEVN TGEFDPFAAL
IPPAKAAGAW VHVDGAFGLW ARASSKRVLT DGIDGADSWT TDGHKWLNTP YDGAMVICRD
AAALATAMNS DAVYLSGAQD AQKNLNLEFS RRARGIPVWA ALRSLGRAGV ATMVEQHCAQ
AARVADGLRA AGYDVLNRVV LNQVLVRAGT DDETAAILAA AQASGDVWFG ATVWQGRPAF
RISVSSWRTE DAHIDRLVAL LTKLRGVHVR
|
|---|
| |