| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1530 |
|---|
| Symbol | |
|---|
| ID | 3753295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 1724737 |
|---|
| End bp | 1725672 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637766379 |
|---|
| Product | ABC amino acid transporter, periplasmic ligand binding protein |
|---|
| Protein accession | YP_372288 |
|---|
| Protein GI | 78062380 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.127687 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACC GACGCCGGTT CATGACCACC GCGATGGTCG CGGCAGCGGG CACCCTTGCA
TGGCGCGCGG CACATGCAGC CGCCGCGACC GCGGACCTCG ATCCGCGCCA GGCTGGCCGC
ATTCGCGCCA CACGCGATGA CGCAGCCGTT CATGAGGCAG CGGGCTATCG CTGGGTACGC
GACGGCGCGT TCACGGTCGC AATCTCACCA CACGCGCCGC CCGTGTCGAC CTACGCGACC
GACGCGCGCA CCGTGGTCGG CGCCGATCCC GACTATGCGC AGCTCGTCGC CGACGCACTC
GGCCGCACGC TCGTGCTGCT GCCGATCGCG TGGGCCGACT GGCCGCTCGG GCTGACGTCC
GGCAAGTACG ACGCGGTGAT CTCGAACGTC GGCGTGACCG AGAAGCGCAA GGAAAAATAC
GATTTCACGA CCTATCGGCT CGGGCTGCAC GGCTTCTACG TGCGCACCGG CAGCCCGATC
GCGAAGATCG CCGGGCCGAA GGACATCGCC GGCCTGCGCA TCATCACCGG CGCGGGGACG
AGCCAGGAGC GCATCCTGCT CGAGTGGAAC AAGCGCAACG TGGCGCAGGG GCTGAAGCCG
GCCGAGCTGC TCTATTTCGA CGACGATGCG GCGTCGCGCG TCGCGCTGCT GTCGGGCCGC
GCCGATGCGG AGTTGAACCC GAATGCGTCG CTCGCGTACG AGGCCGCGCG CACGGGCAAG
ATCCGCCTCG TCGGCGTCGT CAATGCGGGC TGGCCGGCCA ATGCCGACGT GGCGATCGCG
ACGCGGCGCG GCAGCGGGCT CGCGCCCGCG CTGACGCTCG CGACGAACGC GCTGATCGGG
AGTGGCCGCT ATGGGCAGGC GCTCGCGCGC TGGGGTTTGC AGAGCGAGGC GATCGCGCAT
GCGGAGACCA ATCCGCCGGG GTTGCCGTCG TTCTGA
|
|---|
| Protein sequence | MNDRRRFMTT AMVAAAGTLA WRAAHAAAAT ADLDPRQAGR IRATRDDAAV HEAAGYRWVR
DGAFTVAISP HAPPVSTYAT DARTVVGADP DYAQLVADAL GRTLVLLPIA WADWPLGLTS
GKYDAVISNV GVTEKRKEKY DFTTYRLGLH GFYVRTGSPI AKIAGPKDIA GLRIITGAGT
SQERILLEWN KRNVAQGLKP AELLYFDDDA ASRVALLSGR ADAELNPNAS LAYEAARTGK
IRLVGVVNAG WPANADVAIA TRRGSGLAPA LTLATNALIG SGRYGQALAR WGLQSEAIAH
AETNPPGLPS F
|
|---|
| |