Gene Bcep18194_B0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_B0001 
Symbol 
ID3751974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007511 
Strand
Start bp38 
End bp1057 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content64% 
IMG OID637764847 
ProductPhage integrase 
Protein accessionYP_370762 
Protein GI78060854 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTTC CCGCCTCTCC CGACACCCCC GCACGCCCGG AAGAAACAGA TCTGTTCGAC 
CGCGGCGCAT CCGACTGGAT CGTCTCGCCA GAAGCCGCCT TCGATGCATG GCTCGCCATG
CAGGACTATC GCCGCTCGTC GGCCGACGTC TACCGCGCGC AGTGGGGCGC GTTTCTCACC
TGGATGCGCG CACACCAGAA GAACCTGGCC ACGGTCGATA CCGCAACCAT CGCGAATTTC
GTCGGCGAGC TGCCGATCCG GAAAACCCAG AGAATGCGCT ATTTGCGGCT GATCGAGCGT
GTGCTCGACC ACATCCGTCG CACCGAATAC GCGTCGACCA ACCCGGCCCG GTTCATTGCT
CAGGATGGCG AAGCGAACTG GCGTAAGGCC CGCGACAACG AACCGACCGG TTTCCTCGCG
CCCGCCGAGC GCGCGGCATT GCTCGCGTAC CTGTTTTCGC CGATCGGCGT ATCCGGTTCA
GCGTACTGGA AAGAACGGCG CGACCGCGCG CTCGTCGCCG CGTTTCTGGG CGCCGGCATT
AAAACCGGTG AAGCTCGCGC ACTTACGATT AGTTGCATCA ATACGAGTGG GACGTCGCTG
CAGATCGAGT CGACGCATCC GGATTTCGCA CGCGAAACCC ACCTCGCCTC GTTCGCGATC
GCCCTACTGG AAGCCTGGCT CACCGAGCGC AAGCGCCAGG ACATTCCGGG GGAACTCGTG
TTCCCGGCAT CCCATGCCGG GCGGCCGATG CACAAGGCGA CAATGCTGCG CGCGATCGAC
GCGATCGTCG AATCCGCCGG GCTCACGTCG TCGCGCACCG CACGCGCGAG CCCGCAAACG
CTGCGCAATA CCTATGCGGC TGAGCTGTTC GAACACGACG TGCCGCCCGA ACGGGTCGGC
AAATGGCTGG GCTTCATGCG GCCGATCTCG TCGAACCGGC TGCATCGCGC ATGGAAGAAC
TGGCGTGACG GTTTGGCCGA CAGCAACGGT GACGCGTCCG ATAGCGACGA AACTCACTGA
 
Protein sequence
MSLPASPDTP ARPEETDLFD RGASDWIVSP EAAFDAWLAM QDYRRSSADV YRAQWGAFLT 
WMRAHQKNLA TVDTATIANF VGELPIRKTQ RMRYLRLIER VLDHIRRTEY ASTNPARFIA
QDGEANWRKA RDNEPTGFLA PAERAALLAY LFSPIGVSGS AYWKERRDRA LVAAFLGAGI
KTGEARALTI SCINTSGTSL QIESTHPDFA RETHLASFAI ALLEAWLTER KRQDIPGELV
FPASHAGRPM HKATMLRAID AIVESAGLTS SRTARASPQT LRNTYAAELF EHDVPPERVG
KWLGFMRPIS SNRLHRAWKN WRDGLADSNG DASDSDETH