| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A4785 |
|---|
| Symbol | |
|---|
| ID | 3749993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 1784917 |
|---|
| End bp | 1786662 |
|---|
| Gene Length | 1746 bp |
|---|
| Protein Length | 581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637763082 |
|---|
| Product | ABC cyclic peptide/siderophore export pump, fused ATPase and inner membrane subunits |
|---|
| Protein accession | YP_369024 |
|---|
| Protein GI | 78066255 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.257895 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCCG CCCACGAGCC TTCTTCCCCG CCGTCCCTCG ACGCTTCCCC CGGCCGCCCC
GCGGCGCGCC TGATCCTTGC GCTGTTGCGC GAAAGCCGCG CGTCACTCGT GCTGGCGCTC
ACCGCGTGCG TATTGAACGG CGTCGCGAGC GTGCTGCTCG TCGCGACGCT GAACCGTGCA
CTCTCGCAGC CCGGCGCGGC CGATGCGTCG CTCGCGTGGC GCTTCGCGCT GTGCGCGGTG
ATCGCACTCG TCACGCGGAT CGTGTCGGGC ACGCTGTTCG CGCGCCTGTC GCAGGACACG
ATGGCGCGAC TGCGCGTGCA TCTCGCGCGG CGCGTCGGCT CGGCCGAACT GCGCGACATC
GAGCGGATCG GCGCGGCGCC CGTACAGTCG GTACTGACCG ACGACGCCAC CAACGTATCG
ATGCTGTTCT TCGCGCTGCC GAACCTGGTC ATGCACGGCT CGATCGTGTT CGGCTGCCTC
GGCTACCTCG CGTGGCTGTC GTGGCCGGTG TGCCTGCTGG CACTGGCCGC GATCATCGCC
GGCTCGCTCG GCTATCACAC CGGCGACCGC CGCGCGATCG CATCGCTCGA AGCGGCCGGC
CAGGCGCAGG ACCGCCTGTT CGGCTATCTC GGCTCGCTGT TTTCCGGCGC GAAGGAACTG
AAGTTGCATG ACGAGCGCGC GCGCCAGTTC GTCGACGGCC AGCTCGGCGC CGCGATCGGC
GAAGTGCGCG ACCACCGCCG CCGCGCGTTC AGCGCGTACG CGGTCGGGGT CGGCTGGATC
ATCTTCCTGT TCTACGTGTT CCTCGGCATC GCGTCGTTCT GGCCGCAGCT CGGCGTGCAT
GCCGATCCGG CCGCGGCCGC CGGCTACGTC GTCGTGTTCC TGTTCATGCT CGTGCCGCTC
GACGGGCTGC TGAACAACCT GCCGACCGTC AACGCGGCCC GCGTGTCGCT CACGCGGATC
GAAGGCGTGA TGGCCGAATT CGGCGCGCTG CGCACGGTAC CGCCGGCGTC CGACGCGCCC
GACGTGCCGC CGGCCGGCGC CGTCACGCTG CGCGGCGTCA CGCATGCGTA CTTCCATGAA
CGCGACGAAC GGATGTTCAG CATCGGGCCG ATCAACCTGA CGATCCAGCC GGGCGAGCTC
CTGTTCATCG TCGGCGGCAA CGGCAGCGGC AAGACGACGC TCGCGAAGGT GCTGACGGGG
CTCTACGAGC CGGAAGAAGG CACGATCGAG GTCGATGGCC GCACGATCGG CTGGCGCGAG
CGCGCCGCAT ACCGGCAGCG TTTCAGCGCG GTGTTCAACG ATTTCCACCT GTTCGATGCG
CTGCTCGGCA TCGTCGATCC CGACGATCCG TCCCGCGCGC AGGCCGATGC GCGCGCGAAC
GCGCTGATCG CGAAGCTCGC GCTCGATCAC AAGGTGAAGG TAGTGGACGG CGCGTTCTCG
ACCCGCGCAC TGTCGACCGG GCAGCGCAAG CGGCTCGCGC TCGTCGTCGC GTACCTGGAG
GACCGGCCGT TCTACCTGTT CGACGAATGG GCGGCCGACC AGGACCCGTC GTTCAAGGCC
GTGTTCTACG AGCAGTTGCT GCCCGAGCTG CGTGCGCGCG GCAAGGCCGT TATCGTGATC
ACGCACGACG ACCGCTACTT CGATCTCGCC GACCGCTTGC TGAAGCTCGA CAACGGGAAA
ATCGTCAGCG ACACGACGCC GGCCAGGACG CGCGCGCAGG ATGGTGTCGA CGCGCTGAGC
GCGTAA
|
|---|
| Protein sequence | MTAAHEPSSP PSLDASPGRP AARLILALLR ESRASLVLAL TACVLNGVAS VLLVATLNRA
LSQPGAADAS LAWRFALCAV IALVTRIVSG TLFARLSQDT MARLRVHLAR RVGSAELRDI
ERIGAAPVQS VLTDDATNVS MLFFALPNLV MHGSIVFGCL GYLAWLSWPV CLLALAAIIA
GSLGYHTGDR RAIASLEAAG QAQDRLFGYL GSLFSGAKEL KLHDERARQF VDGQLGAAIG
EVRDHRRRAF SAYAVGVGWI IFLFYVFLGI ASFWPQLGVH ADPAAAAGYV VVFLFMLVPL
DGLLNNLPTV NAARVSLTRI EGVMAEFGAL RTVPPASDAP DVPPAGAVTL RGVTHAYFHE
RDERMFSIGP INLTIQPGEL LFIVGGNGSG KTTLAKVLTG LYEPEEGTIE VDGRTIGWRE
RAAYRQRFSA VFNDFHLFDA LLGIVDPDDP SRAQADARAN ALIAKLALDH KVKVVDGAFS
TRALSTGQRK RLALVVAYLE DRPFYLFDEW AADQDPSFKA VFYEQLLPEL RARGKAVIVI
THDDRYFDLA DRLLKLDNGK IVSDTTPART RAQDGVDALS A
|
|---|
| |