| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3345 |
|---|
| Symbol | |
|---|
| ID | 3748512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 201113 |
|---|
| End bp | 203329 |
|---|
| Gene Length | 2217 bp |
|---|
| Protein Length | 738 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637761609 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_367591 |
|---|
| Protein GI | 78064822 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTGT TGCGCGTTCG ACGGGTTTTG ATACGATGCG CGACATTTTA TCGCAATGCG
AATGATTCTT ACTTGCATTT TTACTTATCC GCCATGACCG TCAGCCTCGC CCGCCCTCCC
GTCCGTCCAC GTCGCGTGGC CGCCGCCCTT GCCTGCGTTG CCGCATCGCT CGCGCACGCG
GACGATTCGC CCGGCGGCGC CACGGCGTTG CCGGCCATCA ACGTCACCGC TGCGCATGAT
TCGCCGCAGC ACCTGACCGA CACGATTTCC ACCGGCGCGC TCGGCACGCG GCGCCAGCTC
GACACGCCGT TCTCGACGAC GATCGTCACG TCGGAGGAGC TCGAGGCACG TCAGCCGTAC
AAGCTCGGCG ACGTGTTCGC GAACGACGCG TCGGTGTCCG ACAACAGCGG CGCGTACAGC
GCGTGGGCCA GCTACATGAC CGTGCGCGGC ATGCAGCTCG ACTGGCAGAA CGGCTTCAAG
ATCGACGGGC TGCCGTTCGT CACGTACGGG ATCACGATGC CGTACGAACA GCTCGATCGC
GTCGAGCTGC TGAAGGGGCT CGGCGGTTTC CTGTACGGCT TCGTGACGCC CGGCGGCGTC
GTCAACTACG TGACGAAGCA GCCGGGCGCC GAACCCGTGC GCAGCGTCGA CGTCGGCTAC
CGGAGCACCA GCGTGTGGAC CGAGCACGTC GATCTCGGCC AGCGCTTCGG GCCGAACGGC
ATGTTCGGCG CGCGGCTGAA CGCGACGCAC GAGGAAGGCA AGACGTACAA CGACGGCAAC
ATCCGCCGCG ACAGCGTATC GCTCGCGCTG CAGGCGAACC TGACGCGCGA CCTGTCGGTG
ACGTTCGGCG CGCTGTACCA GGACCGCCGC ACGACGGGCC AGACGCCGTC GATCTTCACC
GGCAGCTACC CGGGCGGCGT GCTGCCCGCG ACCATCAGCG GCGGCACGAC GAACCTCGGC
GGCAAGGACC AGTACCTGAA CACGAACCTG CAGCTCTACA CGGCCGGGCT GCAATACCAG
CTCGCGCCCG ACTGGCAGCT CGACGTCGCG TACAGCTACA GCAAGGCGAC GCGCCGCCGC
AACGAAAGCA CGCTGACCCT GCAGGACGCG GCCGGCAACT ACACCGACAG CCGCTACGTC
GGGATGGAGG ATCACCGCTT CAGCCAATGG CGAGCGATGG TCGAGGGCAA GGTGCGCACG
GGCCCGTTCA GCCACCAGAT CGTGCTCGGC GCATCGTGGC AGAAGCAGGC GAACGACTAT
TCGGCGAACA GCGTGTTCGT GCCGCTCGGC GCCGGCAACC TGTATGCGCC GAACCCGTAC
CGCTACGACA GCCCGCACGG CTTCGTCCAG TACCGCACGA GCGAGATCGT CCAGAAATCG
CTGTTCGCGA GCGACACCGT GCAGCTCACC GAGCGGTGGT CGGTGCTCGC CGGCGTGCGC
TACATGAACT ACGAGCAGCG CTCGTTCCAG GCAAGCGGCG TCGAGGATCC CGGCTACCGC
CAGAACGGCG TCGTGACGCC GACGTTCGCG GTGATGTTCA AGCTCGCGCC GACCACCACC
GCGTACGCGA GCTACGCCGA ATCGCTCGAG CCCGGCAGCC GCGTGAACGA CGTCTACGCG
AACGCCGGCC AGGTGCTCAA ACCGCTGCGC AGCAAGCAAT ACGAGTTGGG GATCAAGAGC
GAGCACGCGC GCTGGAGCGC AACGGCCGCG CTGTTCCGCA TCGAGCGCAG CGCCGAGTAT
GCGAACGCCG CGAACGTCTA CGTGCAGGAC GGCGAATCGA TCATCCAGGG GATCGAGTTC
GGCGCTCGCG CGAAATTCGG CGCGCGCTGG ACCGCGGGCG TCGACGCGAT GCTGCTCGAC
GCGTGGTACG CGAACGGGAT CGGTAACAAC GGCAACCGTG TTGCGGGCGC GCCACGTTTC
GTGCTCGCCG GCGACATCGG CTATGCGGTG CCGGGCGTGC CGGGGCTGAC GCTCGGCGTC
GATGCGAAAT TCACCGGCGC AACGCCGCTG CGCGCGGCCG GCGGCCTCGA CGCGCCGGGC
TTTCTCGTCG TCAATGCGGG CGCGCGCTAC CTGACACGGG TCGGCCGCCA CGATGTGACG
CTGCGCGCGT CGATCGACAA CGTGCTGAAC CGCCGCTACT GGGAATACCA GTACGCGGAC
TATGTGAAGC CGGGCGACCC GCGCACGGTG AGCCTGAGCG CGAAGATCGA CTTCTGA
|
|---|
| Protein sequence | MELLRVRRVL IRCATFYRNA NDSYLHFYLS AMTVSLARPP VRPRRVAAAL ACVAASLAHA
DDSPGGATAL PAINVTAAHD SPQHLTDTIS TGALGTRRQL DTPFSTTIVT SEELEARQPY
KLGDVFANDA SVSDNSGAYS AWASYMTVRG MQLDWQNGFK IDGLPFVTYG ITMPYEQLDR
VELLKGLGGF LYGFVTPGGV VNYVTKQPGA EPVRSVDVGY RSTSVWTEHV DLGQRFGPNG
MFGARLNATH EEGKTYNDGN IRRDSVSLAL QANLTRDLSV TFGALYQDRR TTGQTPSIFT
GSYPGGVLPA TISGGTTNLG GKDQYLNTNL QLYTAGLQYQ LAPDWQLDVA YSYSKATRRR
NESTLTLQDA AGNYTDSRYV GMEDHRFSQW RAMVEGKVRT GPFSHQIVLG ASWQKQANDY
SANSVFVPLG AGNLYAPNPY RYDSPHGFVQ YRTSEIVQKS LFASDTVQLT ERWSVLAGVR
YMNYEQRSFQ ASGVEDPGYR QNGVVTPTFA VMFKLAPTTT AYASYAESLE PGSRVNDVYA
NAGQVLKPLR SKQYELGIKS EHARWSATAA LFRIERSAEY ANAANVYVQD GESIIQGIEF
GARAKFGARW TAGVDAMLLD AWYANGIGNN GNRVAGAPRF VLAGDIGYAV PGVPGLTLGV
DAKFTGATPL RAAGGLDAPG FLVVNAGARY LTRVGRHDVT LRASIDNVLN RRYWEYQYAD
YVKPGDPRTV SLSAKIDF
|
|---|
| |