| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3318 |
|---|
| Symbol | |
|---|
| ID | 3748484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 163338 |
|---|
| End bp | 165041 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637761581 |
|---|
| Product | thiamine pyrophosphate protein |
|---|
| Protein accession | YP_367564 |
|---|
| Protein GI | 78064795 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCATT CCAAGGATCT CGAGCAGCCC GCCACCACCG GCGCGCGACT GCTCGTCGAT
GCGTTGCTCG CCAATCACGT CGAACGCGTG TTCTGCGTGC CGGGCGAGAG TTTCCTCGCC
GTACTCGATG CGCTCGCGGA CGACACCGCC CGCATCCAGA CGGTCGTCTG CCGCCACGAG
GCGGCCGCCG CGAACATGGC CGAGGCCGTC GGCAAGCTGA CCGGCCGCCC CGGCATCGCA
TTCGTCACGC GCGGGCCCGG CGCGACCCAT GCGTCGATCG GCGTGCACAC CGCGTTCCAG
GATTCGACGC CGATGATCCT GTTCGTCGGC CAGTGCGCGC GCGAGCACCT CGACCGCGAA
GCCTTCCAGG AAATCGACTA CCGGCGGATG TTCGGCCAGA TGGCGAAATG GGTCGCGCAG
ATCGACGACC CGCGCCGCAT TCCCGAATAC CTGAGCCATG CGTTCCACGT CGCGACGTCC
GGCAGGCCCG GCCCGGTCGT GCTCGCGCTG CCGGAAGACG TGCTGTCCGA AGCATGCGCG
CCGCAGCCCG TCGTGCCGGC CGCGAAGCGC GTCGCGGCCG CGCCGTCGGC CGCGCAGCTC
GACGAGTTGC GCGAGCGGCT CGCGCGCGCG GAACGGCCGT TCGCGATCGT CGGCGGCAGC
GGCTGGACGC CCGACGCGTG CGCGAACCTG CGCACCTTCG TCGAGCGCTG GCAGTTGCCG
GTGGCCTGCG CATTCCGCTA CCAGGACACG ATCGACAACG CGCACCCGAA CTACGCGGGC
GACGTCGGGC TCGGGATCAA CCCCGCGCTC GGGAAGCGCA TCCGCGACGC CGACCTGCTG
CTCGTGATCG GGCCGCGCCT CGGCGAAGCG ACGACCGGCG GCTACACGCT GCTCGACATC
CCGAAGACGC GCCAGACGCT GATCCACGTG CACCAGGGCG CGGACGAGCT CGGCCGTGTG
TATGCGGCCG ACCTGCCGAT CGTGTCGGGC ATGCCCGAGA TCGCCGCGCC GCTCGCCGCG
CTCGAGGCGC CCGAGCACCC GGCGTGGGCC GGCACGGCTG CCGACGCGCA TCGTGCGTAT
CGCGAATGGC ATGCGCCGCT GCCGATGCCC GGCGACGTCC AGCTCGGCGA CGTGATGGTG
CAGCTGCGCG AGCGCCTGCC GCATGACGCG ATCCTCACCA ACGGCGCCGG CAACTATGCG
ATCTGGCTGC ATCGCCACTT CGCGTACCGG CACTTCCGCT CGCAGCTCGC GCCGACCAGC
GGCGCGATGG GCTACGGCGT GCCAGCCGCG CTTGCCGCGA AGTCGCTGTA CCCGTCGCGC
GCCGTCGTCG CGCTCGCGGG CGATGGCTGC TTCATGATGG CCGGCAACGA GCTCGCGACC
GCGATGCAGT ACGGGCTGAA CATCGTCGTG ATCGTCGTCA ACAACGGGCA TTTCGGCACG
ATCCGCATGC ATCAGGAGCG CAACTACCCG GGACGCGTGC ACGGCACGGG GCTCACGAAT
CCCGATTTCG CCGCGTATGC GCGCGCGTTC GGCGCGCATG GCGAGACCGT CGAGCGCACC
GCCGATTTCG CGCCCGCGCT CGAACGCGCG CTGACCTGCG GGCTGCCCGC GCTGATCGAG
ATCCGTATTC CGCAGGACGC CAGCACGCCG GCCGCGACGC TCGAGCAGAT CCGCGAACAG
GGCCGCCGCG CACGCGGCGG ATGA
|
|---|
| Protein sequence | MSHSKDLEQP ATTGARLLVD ALLANHVERV FCVPGESFLA VLDALADDTA RIQTVVCRHE
AAAANMAEAV GKLTGRPGIA FVTRGPGATH ASIGVHTAFQ DSTPMILFVG QCAREHLDRE
AFQEIDYRRM FGQMAKWVAQ IDDPRRIPEY LSHAFHVATS GRPGPVVLAL PEDVLSEACA
PQPVVPAAKR VAAAPSAAQL DELRERLARA ERPFAIVGGS GWTPDACANL RTFVERWQLP
VACAFRYQDT IDNAHPNYAG DVGLGINPAL GKRIRDADLL LVIGPRLGEA TTGGYTLLDI
PKTRQTLIHV HQGADELGRV YAADLPIVSG MPEIAAPLAA LEAPEHPAWA GTAADAHRAY
REWHAPLPMP GDVQLGDVMV QLRERLPHDA ILTNGAGNYA IWLHRHFAYR HFRSQLAPTS
GAMGYGVPAA LAAKSLYPSR AVVALAGDGC FMMAGNELAT AMQYGLNIVV IVVNNGHFGT
IRMHQERNYP GRVHGTGLTN PDFAAYARAF GAHGETVERT ADFAPALERA LTCGLPALIE
IRIPQDASTP AATLEQIREQ GRRARGG
|
|---|
| |