| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_C7612 |
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| Symbol | |
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| ID | 3734674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007509 |
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| Strand | - |
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| Start bp | 1251227 |
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| End bp | 1254571 |
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| Gene Length | 3345 bp |
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| Protein Length | 1114 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637761313 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_367300 |
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| Protein GI | 78060725 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATTG CTGCTGCATT GAAGGGCTAT TCGCAGGCGA CTCGCCAGAT CCAGATCGAT
ACGGCGATGC CGGGCGCTTT CGCGGTCGAG CGGTTTCATG GCCGGGAAGC GATGGACGAG
TCCTTCCGGT TCGAGATCGA CGTGCTGTCG AGCACGCCGT TCCTCGACCT GAATCCGCTG
CTCGGCACGG CGATCCGCCT GCGTCTCGCG ACCGGCGCGG GCGAGCGCTG CTGGAACGGG
TACGTCGTGC GGGCCGCGTA CAGCGACAGC GACGGCGAGA TCACGCGCTA CCGGCTGACC
ATGGCCTCCT GGCTCGAACT GCTCCGGCTG CGCCGCAACT GCCTGTATTT CGTCGGCCTC
GATACCGAGG GCATCTGCGA GCGCGTGTTC GGCGACTATC CGGAGGCGCA TCGGCGCTAT
GAACTGAAGG AGCCGTTGCG CACGTTCGAT CTGCGTGGCC AGTATCGCGA AACCGACTTC
GACTTCGTGA TGCGCCAGTT GTCCGAGGCC GGCCTGTCGT TTCGGATCGA GCATGCACAG
GACGCCGGCG AGAAACCGTC CGGCAACCAT ACCGTCGTGG TGTTCGACCG GCGCGCCGAA
CCGCCCAAAG GCAGCACCGT CGCCTATAAC CGGCAGGACG TGGGCGACCC CGACGGCGTA
TTGACCTATT TCACCACGCG GCACCAACTG GTCCCGGATC GCGTCACGGC CGCGAGCTGG
AAAGCCAGCA ATCTCGTTGC GCTCGCCGGG CATGCCGAGG GCGAGGCCGA TCGCGATGCA
CCCGCGATGC CCGCGCGCGA AGTGCTGGAC GCGCAGCGTG CCGGCCGCTT CGAGACGTCG
GACCAGGCGC AGCGCTACGC GTCGCAGCGT CTGGACGCGC TGCGCCTGTC GAAGCGGATT
CACTATGGCG CCGGCTCGTC GCGTACGCTG GAGATCGGCA AGGTTCACAC GCTGACCGGC
TATCCGGACG GTACGGTTTC GTTCGTCCCG CTGACGCTCG AGCACGAGGC GGTCAACAAT
CTCGGTGCCG ATATCGCGCA ACTGCTCGAG CACGGCGAAC TGGAGCAGGG GCTCTATCGC
AACCGCTTTG CCGCGGTGCC GCCGGGCGTG CCGATCGTGC CGCCTCATCG CGACCGGCCG
GTCGTGCAGG GCGTGCAGAC CGCGATCGTC GTCGGCGAGC CGTCGAACCG GGTGAGCAGC
ACGCGCGACC ACCAGGTGCG CGTGCAGTTT CCGTGGATGC GCGGCACGGC GCCGCTGCCG
GGCGGACTGA CCGACACCGC GAGCCGGTCG AACCCGCAGG GGCATGCGCC CGGCGACCAT
CGATCCGGCG TGGTTGCGCG CATCGCCGAA CAGGCGGCGG GCCCGAACTT CGGCCACAGC
TTTACGCCGC GCATCGGCGC GGAAGTCGTG GTCGGCTTCG ACTCGGGAAA CATCGACATG
CCGGTCGTGC TGGGCCAGCT TTACGGCGGC CGCGTGCAGC CCCCGTTCGC GGCCGGTGAA
GGCAGCAGCG CGAATCACGC GGGCGTGCTG ACCGGCATGC AGACGCAGAC ACTCGACGGC
ACGGCGGGCA GCCGCTGGGT GATGGACGAT GCGTCGGGCC AGTTGCGTCA TGAACTGGGC
AACAGCGTCG CGAACAGCCG GCTTGCGCAA GGCTATCTGA TCGATCAGCA GGGCGCGGTT
CGCGGTGCCT ATCGTGGCGA AGGTTTTGAT CTCGCGACCG AAGGCTGGGG CGTCGTGCGG
GCGGGCGACG GTGTGCTCGT GTCGGGCACC GCGCGCACGG AAGCGGCTTC GACGCAAATG
GATCTGGGAG AAAGCGTTGC CCAGTTGAAG CAGGCGGTGA AGACCGCACA GGGTCTCGAC
GAGGCGGCGG CGCGTGCAAC GGCCGGCCGG CTGACGGCGA ACGCCGCGCA GGCGGATTTC
CTGAAGGCGA TCGATCCCGC GCAGGACGGC AAGTACACGG GTGCGGTGAA CGGGCAGAGC
GCGACCAAAC CGGCTGCCGG CGGAACCGGC GGCAGCGGGG ATCCGGTCGA GCGCTTCGCG
GTGCCGGCCG TCGTGCTGGA GTCGCCGCAA AACGTCGTGA TGAGTACCGG CAACAGTGCG
GTGTCCTATG CGGAGAAGCA CGTGCACCTG ACCGCGCAGG GCGATGCGCA TCTGGCTGCC
GGCGCGACGG TCGCCGGTGC GTCCGGCGAT GCGGCGAGCG TGTACGCGGC CGCAGGCGGA
ATCAAGGCCG TGGCCGGCCA CGGGCCGGTC AGTGTCGAGG CGCATGCGTC GTCGATGCAG
ATCCTGGCCG ACCAGTCGGT GTGCATCACG TCGTCGGATG ACCGGATCGA CGTGCTCGCG
AAGGATGCGA TCGTGCTTCA GCAAGGGCCG AGCCGGATCA CGCTGAAGGG CGCGGACATC
CTGGTCGAGA CGCCCGGATC GTTTGCCGTC AAGGCGGGTG CCCATCCGTT CATGGGGCCG
GGTGCGCAGT CGCCGGTGCT GCCGGCCTTC CCGATTCCCG TGCCGCTCGC GCTTTACGAC
GAGCAACTGC GCTTCGTCAA CGCGGACGGC GTGCCGCTGT CGAAGGTTGC CTATCAGTTG
AAGCTGGCCG ACGGCACCAC GGCGTCGGGC GTGACCGATG ACGCGGGCAA GACCGAGCGC
GTGGCGTCGG CGAGCCCGCT GGGGATCCTG TCGGCGCTGC TGACCCCGAC CCAGATGGTG
GACTGCTGCG GACGCACGTC GGGTACGCCG CCAGCGCCGG TCGAAGTCAA GATCAAGGGC
GTGCAGACGA ACCAGTTTCA GTTGGGGGAA TCGGAGAAGT CGGTCGAGGT CGACGCCCAT
GAGCGGGTGC TGACCGCGGG CGAAATTGAA ATGGCCCGGA CAGTCTTCAA GGACGGTATC
GACTACGACA AGGTGCGGGT GCACAAAGGG AGTTACTTCT GGTTCAACCT GCAAAACAAG
AACACCGCCG TCACGCCGAA CGGGAAGATG TATTTCCTTG ACGACCTGTA CGTCGACGAT
TTCTCGGCAA TGAACGGCCC GAACATCTGG AAAAGAAGCC TGTTCATGCA CGAAATGACC
CATGTCTGGC AGTACCAGCT TGGGTATGCG GTGCGATGGC ATGCGCTGAC CGTCACGATT
CGAGGACAGA GCGCATACGA ATACACCGTC GCGCCAGGTG CGGTATTTCA CGATTACAAC
ATGGAGCAGC AGGGCAACCT GGTCGCGGAT TACTACGCCG TGCAGGTGCT GAAGGCGCCT
TTCGCCGTCT TTCATCGTGG CTACGTCGGC ACGCCGTTCG AGCTCGATCA TGTCCTTGCT
CCGCTCCTCG AGGATCCCAA GAATGCAGAC AATCTTCCGA AGTAG
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| Protein sequence | MDIAAALKGY SQATRQIQID TAMPGAFAVE RFHGREAMDE SFRFEIDVLS STPFLDLNPL
LGTAIRLRLA TGAGERCWNG YVVRAAYSDS DGEITRYRLT MASWLELLRL RRNCLYFVGL
DTEGICERVF GDYPEAHRRY ELKEPLRTFD LRGQYRETDF DFVMRQLSEA GLSFRIEHAQ
DAGEKPSGNH TVVVFDRRAE PPKGSTVAYN RQDVGDPDGV LTYFTTRHQL VPDRVTAASW
KASNLVALAG HAEGEADRDA PAMPAREVLD AQRAGRFETS DQAQRYASQR LDALRLSKRI
HYGAGSSRTL EIGKVHTLTG YPDGTVSFVP LTLEHEAVNN LGADIAQLLE HGELEQGLYR
NRFAAVPPGV PIVPPHRDRP VVQGVQTAIV VGEPSNRVSS TRDHQVRVQF PWMRGTAPLP
GGLTDTASRS NPQGHAPGDH RSGVVARIAE QAAGPNFGHS FTPRIGAEVV VGFDSGNIDM
PVVLGQLYGG RVQPPFAAGE GSSANHAGVL TGMQTQTLDG TAGSRWVMDD ASGQLRHELG
NSVANSRLAQ GYLIDQQGAV RGAYRGEGFD LATEGWGVVR AGDGVLVSGT ARTEAASTQM
DLGESVAQLK QAVKTAQGLD EAAARATAGR LTANAAQADF LKAIDPAQDG KYTGAVNGQS
ATKPAAGGTG GSGDPVERFA VPAVVLESPQ NVVMSTGNSA VSYAEKHVHL TAQGDAHLAA
GATVAGASGD AASVYAAAGG IKAVAGHGPV SVEAHASSMQ ILADQSVCIT SSDDRIDVLA
KDAIVLQQGP SRITLKGADI LVETPGSFAV KAGAHPFMGP GAQSPVLPAF PIPVPLALYD
EQLRFVNADG VPLSKVAYQL KLADGTTASG VTDDAGKTER VASASPLGIL SALLTPTQMV
DCCGRTSGTP PAPVEVKIKG VQTNQFQLGE SEKSVEVDAH ERVLTAGEIE MARTVFKDGI
DYDKVRVHKG SYFWFNLQNK NTAVTPNGKM YFLDDLYVDD FSAMNGPNIW KRSLFMHEMT
HVWQYQLGYA VRWHALTVTI RGQSAYEYTV APGAVFHDYN MEQQGNLVAD YYAVQVLKAP
FAVFHRGYVG TPFELDHVLA PLLEDPKNAD NLPK
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