Gene Pcar_3083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_3083 
Symbol 
ID3725790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3596499 
End bp3597887 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content59% 
IMG OID637752694 
Producttrypsin-like serine protease 
Protein accessionYP_358488 
Protein GI77920673 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones82 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCA AGTCTCGTAT GCTGTTAAGT TGCCTGACGT TACTGCTGAT CGCCGTCCCG 
GCTTTGGCGG TTCCCGACTT CGCTGACCTG GCGGTCCATC TCAAACCGTC GGTAGTCAAC
ATCAGTACCT CCAAGACGGT ACGCTCCCAG CGTCCCGTCT TTCCCGGGCA ACCTTCCCCT
TACGACGAAT TCTTCGAGGA TTTTTTCGAT CGCTTTTTCC GAGGCCAACC GATGCCGCGT
AAAGAACGCT CCCTCGGTTC CGGCTTTATC ATTTCCGCCG ATGGCTACAT CCTGACCAAC
GATCACGTGG TGGACGGTGC CGACGTCATC AAGGTGCGAC TGGCCGACGG CCGTGAATTC
AGCGGAACGG TGCAGGGCCT CGATCCTAAA CTGGACCTGG CCCTGGTAAA AATCGATGTC
GGCCAGGAAC AGTTGCCGGT CGCCGAACTC GGCGATAGCG AAAAACTCAG GGTCGGCGAA
TGGGTCATGG CCATCGGCAA CCCCTTCGGA CTGGAGCAGA CGGTCACCGT CGGCATCGTA
TCGGCCAAGG GGCGCGTCAT CGGCGCGGGG CCTTATGACG ATTTCATCCA GACCGACGCC
TCCATCAACC CCGGCAACTC CGGCGGCCCC CTGTTCAACG AGTCCGGCCA GGTGATTGGC
ATCAATACGG CGATCGTGGC CGGCGGTCAG GGCATCGGTT TCGCCATCCC GGTCAACGCC
GCAAAATCCA TTATTCCCCA ACTGCGCGAC ACGGGCCATG TGGTGCGTGG CTGGATCGGC
GTTACCGTGC AGGAAGTCAC CCAGGAACTG GCGGAATCTT TCGGCCTGAA AAAAGCCCGG
GGCGCTCTGG TTACCGATGT CCAGAAGGAC TCCCCCGCTG AAAAGGCCGG CCTGCTCCGG
GGAGACATCC TCCTTGCACT CAACGGTAAA GAGTTGAAAA CCCTTGGCGA TCTACCCAAA
ATGGTCGCCT CTTTGCCCGT CGGGAAAAAA GCCAAGCTGA CCTTGTTCCG GGAGGGCCGC
GACAAAACCG TCCATATCAC CATAGGAACC CAGGATAAGG CACAGTCGTC CTCCAAGGCG
ACAAAACCCG CTAAAGTAGA AAATGCCGAG AAGGCTCTGG GACTGTCGGT CCTCGACATT
ACCCCGGAAG TCGCCAGCCG TTATCGTCTG TCCGTCGAAC AAGGGGTGCT GGTCACCGCC
GTCGAACCGG ATGGCCCGGC CAGCGAAAAA ATCCGCGCTG GCGATGTGCT GCTGGAAATT
AACGGCAAAG CCGTCGTATC GACCTCTCAG CTACGTACCC TGCTTACCGA CATAGAAGGC
GGGAAAGTCG TACGGGTGCT GATTCAACGC CGTGACCAGA CCCTCTATAC CACGGTAAAA
TCGAAGTAA
 
Protein sequence
MKLKSRMLLS CLTLLLIAVP ALAVPDFADL AVHLKPSVVN ISTSKTVRSQ RPVFPGQPSP 
YDEFFEDFFD RFFRGQPMPR KERSLGSGFI ISADGYILTN DHVVDGADVI KVRLADGREF
SGTVQGLDPK LDLALVKIDV GQEQLPVAEL GDSEKLRVGE WVMAIGNPFG LEQTVTVGIV
SAKGRVIGAG PYDDFIQTDA SINPGNSGGP LFNESGQVIG INTAIVAGGQ GIGFAIPVNA
AKSIIPQLRD TGHVVRGWIG VTVQEVTQEL AESFGLKKAR GALVTDVQKD SPAEKAGLLR
GDILLALNGK ELKTLGDLPK MVASLPVGKK AKLTLFREGR DKTVHITIGT QDKAQSSSKA
TKPAKVENAE KALGLSVLDI TPEVASRYRL SVEQGVLVTA VEPDGPASEK IRAGDVLLEI
NGKAVVSTSQ LRTLLTDIEG GKVVRVLIQR RDQTLYTTVK SK