Gene Pcar_3073 details

Gene Information

• Locus tag: Pcar_3073
• ID: 3725780
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 3587337
• End bp: 3587756
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637752684
• Product: diadenosine tetraphosphate (Ap4A) hydrolase
• Protein accession: YP_358478
• Protein GI: 77920663
• COG category: [F] Nucleotide transport and metabolism; [G] Carbohydrate transport and metabolism; [R] General function prediction only
• COG ID: [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.00000547688
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTGTC CCATGTGTAC ACGCTGGCAG GATCAGCCGC AGTTGCGGAT CGCCGAGTTC 
GAGCACTGCT ACGCCATGCT CAACGGCGAT CAGTTCTTCC CGGGTTATAC CCTGCTGTTT 
ACCAAGCGGC ATGTGACCGA GCTGTTTCAC CTGCAGCCGG CCGTTCGGCA GGCGGTCATG 
GAAGAGGTCA GCCGCATGGC GGCAGCCCTG GCATCCGTTT ATAATCCGGC CAAGATGAAT 
TACGAGCTGC TCGGTAATAT GGTGCCCCAT ATGCACTGGC ACCTGGTGCC GCGCCAGACC 
ACCGATCCGC TGTGGCCGCG CCCCATCTGG AGCGAGCCCC ACGAAGATTG CCTGCTGTCC 
GATGATCGGT ATGTCCAGGC GATTCGCAGC ATCCGCGCCG CGCTTGGGCT GATAGACTAA 

 

Protein sequence

MNCPMCTRWQ DQPQLRIAEF EHCYAMLNGD QFFPGYTLLF TKRHVTELFH LQPAVRQAVM 
EEVSRMAAAL ASVYNPAKMN YELLGNMVPH MHWHLVPRQT TDPLWPRPIW SEPHEDCLLS 
DDRYVQAIRS IRAALGLID