Gene Pcar_2990 details

Gene Information

• Locus tag: Pcar_2990
• Symbol: atpC-1
• ID: 3725697
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 3501121
• End bp: 3501501
• Gene Length: 381 bp
• Protein Length: 126 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637752601
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_358395
• Protein GI: 77920580
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria); [TIGR03166] alternate F1F0 ATPase, F1 subunit epsilon

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 0.136742
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGCTAA GGGTCCAGAC GCCGGCGGAG CGGATCCTCG ATTGCCCCGT AACCAAAGTG 
GTGGCCGAAG GTTTGAACGG TTCGTTCTGC CTGCGGCCAC GGCACGTCGA TCTGGTATCG 
GCGGTGGTGC CGGGCCTGTT CTATTACGAA ACGGCAGAGG GCCAAGGGCA CTACATCGCC 
CTCGATCGTG GTTTGCTGGT GAAACGCGAG ACGCTGGTGT CGGTGTCGGT GCGCAATGCC 
GTTGCAGCCG GGGAGCTGGA GGATTTGCTC GAAGTCGTAC AGCTGCGCTT CAAGGCCCTG 
GATGAGCAGG AACGGGTGGT TCGCAGTGCC GTGGCGCGTC TGGAATCCGA CTTTTTACGG 
CGCTTTATGG AGCTATCATG A 

 

Protein sequence

MRLRVQTPAE RILDCPVTKV VAEGLNGSFC LRPRHVDLVS AVVPGLFYYE TAEGQGHYIA 
LDRGLLVKRE TLVSVSVRNA VAAGELEDLL EVVQLRFKAL DEQERVVRSA VARLESDFLR 
RFMELS