| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2989 |
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| Symbol | atpD-2 |
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| ID | 3725696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 3499700 |
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| End bp | 3501124 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637752600 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_358394 |
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| Protein GI | 77920579 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit
[TIGR03305] alternate F1F0 ATPase, F1 subunit beta |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.00236376 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAC AGGCTGATCG TTCAGGAACC GTGGTGGCAG TGCGCGGCGG CATTGTCGAC
GCCCGCTTTG ATGGGGAGAT GCCGGCGCTG CACTCCCTGC TGCTGGCCGG AGCACAGGAC
GAGATCGTGG TGGAGGTCAT GCTGCATCTC GACGGCGGCC ATGTGCGCGG CAATGCCTTG
ACACCGACCC AGGGGCTGGC TTGCGGAGAT ACCATCAAGG ACAGTGGGGC GCCCCTGCAG
GCACCGGTCG GGCAGGCAAT CCTGGGGCGG GTGTTCAATG TCTTCGGTCA GCCCATCGAC
AGGCGTGAGC CGCCCGACGG GTGTCGTTGG CGCTCGGTTC TGACCAAGCC GGCCGGCCTG
ACGGAACGGT CGTCCAAAAC CGAAATGTTC ATCACCGGCA TCAAGGCCAT CGATGTGCTG
GCACCGCTGG AACGGGGCGG CAAAGCCGGT CTTTTCGGTG GCGCCGGGGT CGGCAAGACC
GTGCTGATTA CCGAACTGAT CCACAACATG GTCGGACAGC ACGAAGGGGT GTCCCTGTTT
TGCGGCATCG GCGAACGCTG CCGCGAAGGA GAGGAATTAT TCCGTGAGAT GCGGGAGGCC
GGGGTACTCG ACAATACGGT GATGGTGTTC GGCCAGATGA ACGAACCGCC CGGAGCGCGG
TTCCGGGTGG GCCTGACCGC CTTGACCATG GCGGAATATT TCCGTGACGA CCAGGGTCGC
GATGTACTGT TGTTGATCGA CAATATCTTT CGCTTTATCC AGGCCGGCAT GGAAATCTCC
GGCCTGTTGG GTCTGATGCC GTCACGACTC GGCTATCAAC CGACAATGGG CACCGAGCTG
GCCGAATTGC AGGAGCGGAT TTCAAGTACC CGGCACGCCG CGATCACCTC GATTCAAGCC
GTGTATGTAC CGGCCGATGA TTTTACCGAC CCGGCAGCGG TACACACCTT CTCGCACCTG
TCGGCTTCCA TCGTGCTGTC GCGCCGGCGC GCCAGCGAGG GGCTCTATCC GGCCATCGAT
CCCCTGGCGT CAACCTCCAA CATACTCAAT CCCCGCATTG TCGGCGAACG CCATTACCGT
CTGGCGCAGG AGATCCGCCG CACCCTGGCA ACCTACGAAG AGCTTAAGGA CATTATCGCC
ATGCTCGGGC TGGAGGAACT GTCGCGGGAA GATCGGCGCA TTGTCTTCCG GGCAAGACGC
CTGGAGCGTT TTTTGACCCA GCCTTTTCAC ACCACCCAAC AGTTTACCGG CATGCAGGGT
CGCACGGTGG CCCTCGATGC GGCGCTAAAT GGCTGTGAGG CTATTCTCAA CGACGAATTT
TCCGAAGCCC CGGAAAAAAT CCTCTACATG ATCGGCGGCC TTGAAGAAGC ACGCCAGCGG
TTGCGCGAGG AGGAAACGGC TGGACATGGA GAGGAGCCGC CATGA
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| Protein sequence | MKRQADRSGT VVAVRGGIVD ARFDGEMPAL HSLLLAGAQD EIVVEVMLHL DGGHVRGNAL
TPTQGLACGD TIKDSGAPLQ APVGQAILGR VFNVFGQPID RREPPDGCRW RSVLTKPAGL
TERSSKTEMF ITGIKAIDVL APLERGGKAG LFGGAGVGKT VLITELIHNM VGQHEGVSLF
CGIGERCREG EELFREMREA GVLDNTVMVF GQMNEPPGAR FRVGLTALTM AEYFRDDQGR
DVLLLIDNIF RFIQAGMEIS GLLGLMPSRL GYQPTMGTEL AELQERISST RHAAITSIQA
VYVPADDFTD PAAVHTFSHL SASIVLSRRR ASEGLYPAID PLASTSNILN PRIVGERHYR
LAQEIRRTLA TYEELKDIIA MLGLEELSRE DRRIVFRARR LERFLTQPFH TTQQFTGMQG
RTVALDAALN GCEAILNDEF SEAPEKILYM IGGLEEARQR LREEETAGHG EEPP
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