Gene Pcar_2966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2966 
Symbol 
ID3725673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand- 
Start bp3475550 
End bp3476209 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content55% 
IMG OID637752577 
Productperiplasmic or secreted lipoprotein OsmY 
Protein accessionYP_358371 
Protein GI77920556 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000000000230813 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGATG ACGAACGTAT CCGAAAATTG ATCGAAGGCG CACTTGCCAA CGATATCCGT 
ATCAAACTGC CCGAAAGCCA TTTACGCATC AGCTACCATG ATGGCACGGC AACGCTTGCC 
GGAACCATCG ATACCATCGC GGGCAAACGC CTGGCCAAAC GCCTGGCCGA ACAGGTGCCG 
GGGGTGCGGC AGGCATACGA CCTGTTGGAT GTCGCCATTG CCCACAGGAT GGGGCACAAG 
GAAATCACAC AACACATCCG CCATGCGTTT ATCCAGGAGC GCAACATCGA TGAGGAACAT 
ATCGATATCG AGACCGATAT CGATGGGCAC GTGACCTTGC GGGGGCGGGT TCATTCCATG 
GTGCAGCACC GACTTTGCGA AGTTATGAGT TGGTGGGTGC CGGGGGTCAG GAACGTGCTC 
AACATGATAA CGATCGTACC GCCGGAAGAG GACAATGACG AGGAGCTCAA GGATAACCTC 
CTGGTCATCC TCGAAAAAGA TCCGTTGGTC GATCCCAAGC ATTTTCAGGT TCAGGTAAGC 
GATGGCATGG TGACATTGCG CGGCCGGGCC AATTCCGATA TCGAAAAAGC GGCGGCAGAA 
AACGACTGCT GGTTCACCCC CGGTGTCGTT GACGTCAATA ATCTTCTTGC TGTCGGCTAA
 
Protein sequence
MNDDERIRKL IEGALANDIR IKLPESHLRI SYHDGTATLA GTIDTIAGKR LAKRLAEQVP 
GVRQAYDLLD VAIAHRMGHK EITQHIRHAF IQERNIDEEH IDIETDIDGH VTLRGRVHSM 
VQHRLCEVMS WWVPGVRNVL NMITIVPPEE DNDEELKDNL LVILEKDPLV DPKHFQVQVS 
DGMVTLRGRA NSDIEKAAAE NDCWFTPGVV DVNNLLAVG