Gene Pcar_2534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2534 
Symbol 
ID3725236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2976163 
End bp2976666 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content57% 
IMG OID637752144 
Productpolypeptide deformylase 
Protein accessionYP_357942 
Protein GI77920127 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGTCA AGGACATTCT GCTTTATCCG CATCCTGCAC TCAAGGAAAT TTGCACGCCG 
GTAACGCAAT GCGACGAGAA CGTCGATTCT TTGATCCAGG ATCTCATCGA TACCATGGTG
GCCGCCGGCC ACTCCGTAGG CGTCGCCGCC CCCCAGATCG GCATTACACG CCGCGTGGTG
GTGGTCGATG TATCCCACAG CAAACTCGGA CGTAAGGAAA ACCATGGCCT GATCGTCATG
ATCAATCCCG AAATCCTCGA ACAGGAGGGG CGCACCGCTT CCCGGGAAGG CTGCATGAGC
GTACCCGATT ACACCGGCAA TGTCACGCGG GCCGAAAGCG TGGTGGTGCA ATATCTCGAC
CGCAGCGGCA ACAAGCAGGT GATCCGCGCC ACGGGGTTCG AGGCGATAGC CCTGCAACAC
GAAATCGATC ACCTCGACGG GTTGCTGTTT CTGGACCGAG TCTCCAGCCT TAAAACTGAT
CTTTTCAGAC GAAAAAAACG CTGA
 
Protein sequence
MAVKDILLYP HPALKEICTP VTQCDENVDS LIQDLIDTMV AAGHSVGVAA PQIGITRRVV 
VVDVSHSKLG RKENHGLIVM INPEILEQEG RTASREGCMS VPDYTGNVTR AESVVVQYLD
RSGNKQVIRA TGFEAIALQH EIDHLDGLLF LDRVSSLKTD LFRRKKR