| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2453 |
|---|
| Symbol | |
|---|
| ID | 3725155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 2888386 |
|---|
| End bp | 2889318 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637752064 |
|---|
| Product | uncharacterized membrane protein |
|---|
| Protein accession | YP_357862 |
|---|
| Protein GI | 77920047 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCCGA CCGTCGAGCA TGACCCCACC CTCTGGCGCA CCATCGATCC GACCCGCATC
GAGGCTTCCA TGCGACAACC GCTGGATGCC GATGTGGCCC GCGATTGGCA CCTGGTGCTG
ACGGCACAGG GCATCGATTC CCGCCTGCAG CCGCTCCTGG GGGGCTGGCA ACTGGCCGTG
CCCGCGCCGG AGCTGGAAAA AGCCGTACAC GAGTTGCAAC TCTTTACCGC GGAAAATCGG
GATTGGCCGC CCCTGCCGCC AACAGCCACC GGATTCGACA ACGCCTGGTT CAACGCCTGC
CTTTTGGCCG CGCTGGCATT ATTTCACAAT ATCACGCGTC TGCCAAACAC CCCCTTCAGC
CTGCGAACCG AGGATTGGCT GCATGCAGGC AACGCCCATG TCGCCGCGAT CCGCAGCGGC
CAATGGTGGC GTCTGGCCAC CGCCCTGACG CTGCATTCCG GCCCATTGCA CCTTGCAAGC
AACATCCTCA TCGGCGGGAT ATTCGTGATC CGCCTGTGCC GCGAACTCGG CTCGGGCGTC
GGGTGGTTTC TGTTGTTGCT GGTCGGCATG GCCGGCAATT TTCTCAACAG CCTGATTCAA
CCCGGCTATC ACCAGTCGGT GGGAGCCTCG ACGGCCATTT TTGGCGCCAT CGGCGTCCTG
GCGGCCCTGA ACGCCCGGCG TCACCGTTTG CGGCTGACAA GGAAATGGAC CCTACCGCTG
GCCGCCGGCC TGGCGCTTCT GGCCCTGCTC GGTACCGGTG AACGCCGCAC CGACCTGCTG
GCGCACCTGT TCGGATTTCT GTGCGGCCTG CTGTCAGGCT GGTTCATCGC GCCGCTGCCG
CAGGCCGGTC CCCGCCTCAA TCGCTGGCTG GGGCTGCTGG CGGCCTTGAT TATAGTGCTG
GCATGGTTGT TAGCCTTGCA GACCATCAGG TAA
|
|---|
| Protein sequence | MAPTVEHDPT LWRTIDPTRI EASMRQPLDA DVARDWHLVL TAQGIDSRLQ PLLGGWQLAV
PAPELEKAVH ELQLFTAENR DWPPLPPTAT GFDNAWFNAC LLAALALFHN ITRLPNTPFS
LRTEDWLHAG NAHVAAIRSG QWWRLATALT LHSGPLHLAS NILIGGIFVI RLCRELGSGV
GWFLLLLVGM AGNFLNSLIQ PGYHQSVGAS TAIFGAIGVL AALNARRHRL RLTRKWTLPL
AAGLALLALL GTGERRTDLL AHLFGFLCGL LSGWFIAPLP QAGPRLNRWL GLLAALIIVL
AWLLALQTIR
|
|---|
| |