Gene Pcar_2445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2445 
Symbol 
ID3725147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2877451 
End bp2878692 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content60% 
IMG OID637752056 
Productflagellar hook-associated protein 
Protein accessionYP_357854 
Protein GI77920039 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clones79 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACC TTATCTCTTC TCTCCAGTCC GGGCAGAGTG TCCCATCGGT CAACCGGACC 
GGACGCGAGA TAACGGACAA CGATGTCGCC AACGCCAAGA ACGGCTCCCG GCAACCGGCA
CAGATTTCAC AGCCTCCCTC CCTGGCCGCG CACGGCGATT TCACGGCTCG AGCAGCTGTT
GGCAGCGGCA TTGCCCGCGC CGAAAACAAC CTCATCACCA ACCAGCTGGT GAGCAGACGT
TCCGGTTACG GTGAAGCATC GGCACAGGCC GGTGCCCTGG CAAAACTGGA GGGCATCATC
TGTGCCCCCG CAAGCGACCT CTGCTCGACC ATGGCTGCTC TTTTCGATGG CCGGCAGGCC
TTCGCCTCTC CCCCCGAACC AGGCCGCGAA CGGGAAAAGG TACTGGCGAC AGGCAAGCAA
CTGACGGACA CCTTCCGGCA GATGGATCGG GAACTTGCCG AAGTTCAAGC GGAGATCGAC
CAGGATATAG CCTCCGCGGT CGATGACCTC AACAAACAAC TCATGCAGAT CGGCGACGTC
GATACCCGGA TCGTCACCAG GGAAGCGGGC GGAAACCCGG CCGACACCCT GCGTGACGAA
CGAAACCGGT TACTGCAAAC GGTCGCCGAA ACCGTCGGCA TCCAGTATAA CGAGATGGAC
ACTGGCGGCG TGTCGGTGCA ACTGCCCTCC GGCGCACCGC TGGTCATGTC CGGCGACGTC
GGCTGTTTCT CCAGCGAGTG CCGCGAAGGC AAGGTCCTGC TCAGCCTGAG CCATGGCGCA
ACCTCCACCG ACTTGAGCAC CAACGACCTG GGCGGTAAAA TCGGGGGATT GATGACCGTC
CGGGACGAAA CCATTGAAAA AACGCGTACC GCCCTCGACC AATTGGCCGA GGAAATCGCG
GCAAGGGTCG ACACCATAGA TTCATCCCAG GTGGTTATGG ATGGCAACAC CGGCCAGGAT
TTTTTTAATG GCGCGACCTC CTCGAACGGC AGTACCACCT TGCTGGAACG GTACCGGCAG
TTGGCCGCCG GCATCCGCAT CGAAGTGAGC CGCAACACTA CCGCTTTGGA AAGCGACGAA
GACTCCCTGA TCCAACTGCA AAACCTGCAG GACACCATCG CCGGAGCTTC TCCGGAGGAG
GAAATGATGT TGCTTTCACA ATACCAGGGC GGCTACCAAA CCGCGGTGAA GAGCCTTTCC
CTGGTGCAGG GCATGCTCGA CTCCTTGCTG GCCAGGGATT AA
 
Protein sequence
MSDLISSLQS GQSVPSVNRT GREITDNDVA NAKNGSRQPA QISQPPSLAA HGDFTARAAV 
GSGIARAENN LITNQLVSRR SGYGEASAQA GALAKLEGII CAPASDLCST MAALFDGRQA
FASPPEPGRE REKVLATGKQ LTDTFRQMDR ELAEVQAEID QDIASAVDDL NKQLMQIGDV
DTRIVTREAG GNPADTLRDE RNRLLQTVAE TVGIQYNEMD TGGVSVQLPS GAPLVMSGDV
GCFSSECREG KVLLSLSHGA TSTDLSTNDL GGKIGGLMTV RDETIEKTRT ALDQLAEEIA
ARVDTIDSSQ VVMDGNTGQD FFNGATSSNG STTLLERYRQ LAAGIRIEVS RNTTALESDE
DSLIQLQNLQ DTIAGASPEE EMMLLSQYQG GYQTAVKSLS LVQGMLDSLL ARD