Gene Pcar_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2387 
Symbol 
ID3725089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand+ 
Start bp2811857 
End bp2812987 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content53% 
IMG OID637751998 
Producthypothetical protein 
Protein accessionYP_357796 
Protein GI77919981 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1509] Lysine 2,3-aminomutase 
TIGRFAM ID[TIGR00238] KamA family protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00000550657 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCATA AAAAGTATAT TACCAATATT GATCAGATAC CGGAGTTGAA CAGGCTTGAA 
GAGCATCACC GTCAAAAGCT TAAAGCCGTG CAAAAACGTT ACGCATTCCG CTCCAACGGC 
TATTACCAGT CTCTCATCGA TTGGAACGAC CCCAAGGACC CCATCCGGCG TATCGTCATC 
CCCAGCGCAG ACGAATTACA ACCCTGGGGC GAGCTCGATG CCTCCGGAGA ATCCCTCTAT 
TCCAAAGCTC CGGGGCTCGA GCATAAATAC CCGGATACCG CGGTACTGCT GGTCAGCGAT 
GTCTGTGGAG CTCTATGTCG CTTCTGTTTT CGCAAGCGTC TGTTTATGGA TGACAATCAG 
GAAGTTGCCA GAGACGTTTC GGCGGGACTG GCTTATATAC GCAAACATAC GGAAATCAAT 
AATGTTCTGG TTACAGGTGG CGACCCGCTG TTGCTATCGA CACGTAAACT GACTGAAATC 
ATTGAACAGC TGCGCGCCAT CGAACACGTA CGCATCATCC GCATCGGCAG CAAAATGCCC 
GCCTTTAACC CCTTCCGGAT ATTGGATGAT CCGGAGTTGC TGGAGATGTT CAAAGCGCAT 
AGTCAACCGA ATCGTCGCAT CTATCTGATG GCGCAGTTCA ACCATCCCAG GGAACTGACA 
TCGGAAGCCC GACGCGCCCT CGATCTGGTT CTGCAAAGCG GGGTAACCGT CATGCATCAA 
ACCCCCATGA TTCGAGGAGT CAATGATTCA GCGGAGGTCT TAACCGAACT CTTCAATGAA 
TTGTCTTATA TGGGTGTGGC CCCTTATTAT GTATTCCAGT GCCGGCCGAC AGAAGGCAAT 
GCCGCTTATA CCGTACCCAT CGAAGAGGGA TACGCCATTT TCGCAAAAGC GCACCAAAAC 
TGCTCCGGGC TGGCGCGCCG CTGCCGCTAC ACCTTATCCC ACGCCACCGG AAAAATCGAA 
GTTGCGGGAT TGACCGACGA CCAGGTATTC TTCCGCTACC ATAGGCCCGC AGATCCGCAA 
CAAAATCTAG GGGAACTCCT GGCCTTCCCT CGTAACCCCG AGGCTTTCTG GCTGGATGAC 
TACACCGACC CGCAGCCCCT GGCGAGCAAC CAGAAAAGCG CATTCTGTTA A
 
Protein sequence
MSHKKYITNI DQIPELNRLE EHHRQKLKAV QKRYAFRSNG YYQSLIDWND PKDPIRRIVI 
PSADELQPWG ELDASGESLY SKAPGLEHKY PDTAVLLVSD VCGALCRFCF RKRLFMDDNQ 
EVARDVSAGL AYIRKHTEIN NVLVTGGDPL LLSTRKLTEI IEQLRAIEHV RIIRIGSKMP 
AFNPFRILDD PELLEMFKAH SQPNRRIYLM AQFNHPRELT SEARRALDLV LQSGVTVMHQ 
TPMIRGVNDS AEVLTELFNE LSYMGVAPYY VFQCRPTEGN AAYTVPIEEG YAIFAKAHQN 
CSGLARRCRY TLSHATGKIE VAGLTDDQVF FRYHRPADPQ QNLGELLAFP RNPEAFWLDD 
YTDPQPLASN QKSAFC