| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2240 |
|---|
| Symbol | |
|---|
| ID | 3724913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 2613947 |
|---|
| End bp | 2615173 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637751841 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_357649 |
|---|
| Protein GI | 77919834 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 91 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAC GCGGTTACTT TTCCGGATTC GGCGGCTGTT TCATCCCCGA AATCCTCAAC
GAAACCTTCG AGGAACTGGT CAAGGCCTAT GAAGCGGCCA AGGCCGACCC GGCTTTCTGG
CAGGAATACA TCGACGTCAT GTCGAACTAC TCGTGCCGCC CCACTCCGCT GACCTTCGCC
GAAAACCTCA CCAACCATTT CGGCGGAGCA CGCATCTACA TCAAGCGCGA GGACCTCAAC
CACACCGGCG CCCACAAGGC CAACAACGTC ATGGGCCAGG GACTGCTGGT CAAACGCATG
GGCAAAAAAC GCGTCATCGC CGAAACCGGC GCCGGGCAGC ACGGTGTGGC CACCGCCACC
ATGGCGGCGC GCATGGGTTT CGAGTGCACC ATCTACATGG GCGAGGAAGA CGTGGAACGT
CAGCGTCCCA ACGTGTTCTG GATGGAGCGT CTCGGCGCCA CGGTGGTACC GGTAACAGAC
GGCTCACGCA CCCTCAAGGA CGCCATCAAC GAGGCCTTCC GCGACTGGGT ATCGAACATG
GACACCACCC ATTACGTCCT CGGTACCGCC TGCGGGCCGC ACCCCTTCCC GGAGATGGTG
GCCTGGTTCC AGTCGATCAT CGGCATCGAA GCGCGCAAAC AGATCCTGGA GCACGAGGGA
CGCCTGCCGA AGAGCGTCTA CGCCTGCGTC GGCGGCGGTT CCAACGCCAT GGGGCTGTTT
TCCGGTTTCA TGGACGATCC GGTGGAGCTG GTCGGGGTCG AGGCCGGCGG CAAGGGACTG
GACAGCGGCA AACACGCCGC CCGCCTCAGC TCCAAGGACG CCAGCGTCGG CGTGGCCCAG
GGTTACAAAA CCTACTTTTT ACAGGATCAT GATGGCCAGA TGAAGGACAC CCACAGCATT
TCTGCGGGGC TCGACTACGT CGGCGTTTCG CCGATCCTGG CGCATTTGCA GGCCATCGGC
CGTGCACGGT TCGAAGCGGC CACCGATGCC GAGGTGCTCG AAGCGGTGAC CCTGACCATG
CGCAAAGAGG GGCTGATCCC CGCTCTGGAA TCGTCCCATG CCTTCGCGCA GGCCTTCAAG
GAGGCCCCGT CCCTGTCGAA AGACGACATC GTCATCATCA ATCAGTCCGG TCGCGGCGAC
AAGGACATCT TCACCGTCGC CGACGCCTTC AACGACCCGG CCTGGAAGGA ATTCATCAAA
CACAAGGCGG AGCAATACGA TGCTTGA
|
|---|
| Protein sequence | MDKRGYFSGF GGCFIPEILN ETFEELVKAY EAAKADPAFW QEYIDVMSNY SCRPTPLTFA
ENLTNHFGGA RIYIKREDLN HTGAHKANNV MGQGLLVKRM GKKRVIAETG AGQHGVATAT
MAARMGFECT IYMGEEDVER QRPNVFWMER LGATVVPVTD GSRTLKDAIN EAFRDWVSNM
DTTHYVLGTA CGPHPFPEMV AWFQSIIGIE ARKQILEHEG RLPKSVYACV GGGSNAMGLF
SGFMDDPVEL VGVEAGGKGL DSGKHAARLS SKDASVGVAQ GYKTYFLQDH DGQMKDTHSI
SAGLDYVGVS PILAHLQAIG RARFEAATDA EVLEAVTLTM RKEGLIPALE SSHAFAQAFK
EAPSLSKDDI VIINQSGRGD KDIFTVADAF NDPAWKEFIK HKAEQYDA
|
|---|
| |