Gene Pcar_2183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2183 
Symbol 
ID3724875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2549234 
End bp2550040 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content49% 
IMG OID637751784 
Producttranscriptional regulator 
Protein accessionYP_357592 
Protein GI77919777 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.000038716 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATA AAATCAGCGA AGTTGCCAAA ATGCTGGGGA TCACCCCCGA AGCCATCCGA 
TATTACGAGC AACAGAACAT CATAAAACCC TCTAAATCAG ATAGCAGCGG TTACCGAAGT
TACAGCGTCT GGGATATGCA TGCCCTGCTC CACGCCCGTT CCTATCGCCA ATACGGGTTT
ACTCTTTCGG AAACGGCCGA CCTCATCAAC AACTGCGACC TTGAAGACAT CATCGGCAAA
CTTCAAGACA AAACGACCGA GCTTGAAAAA GAGGCCGCCT ATGCCTTGAG CCTGGTAAAA
AGCATTCACC ACATGCAGGA AATCATGGCC GATGCCGAAA CCTTTATCGG CAAATACCGC
ATCGAGCAAA GACCCGCTAT GTACCGCCTG GACAATGAAG ACCAATACGT GCTCATCAAA
GACCCTCAAA TCAAAAAGGA AACCTGCAGG TGGATCGAGC ATGTACCGTT TGTATTTACA
AGCGCGCGTT GGACCAAGGA AGAATACGAA CAAGGAGGAA AAAAACATTA CTTCGGTCTG
TGCATCGAGG AGGAATTCGC TGATTTTTTA CCGGATGACC TCCCCCCATA CATCACTTAC
CTGCCTTCCC GTTCTTGCGT TTATACCGTT ATACAATCCT GCCCGAGCAA AAGACTTACG
CCGCAACGCC TGCAACCGGC CATTGCATAT ATGCGCGAGC AGGGCATGTC ATTAACCGGC
GACATCATCA GTCGGGTTGT CAACTATCGC AAGACAACCG ACGAATATGT CAACTACCAC
CAGGTCTGGC TGCCCTTCGA AGAATAA
 
Protein sequence
MKYKISEVAK MLGITPEAIR YYEQQNIIKP SKSDSSGYRS YSVWDMHALL HARSYRQYGF 
TLSETADLIN NCDLEDIIGK LQDKTTELEK EAAYALSLVK SIHHMQEIMA DAETFIGKYR
IEQRPAMYRL DNEDQYVLIK DPQIKKETCR WIEHVPFVFT SARWTKEEYE QGGKKHYFGL
CIEEEFADFL PDDLPPYITY LPSRSCVYTV IQSCPSKRLT PQRLQPAIAY MREQGMSLTG
DIISRVVNYR KTTDEYVNYH QVWLPFEE