Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2183 |
Symbol | |
ID | 3724875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 2549234 |
End bp | 2550040 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637751784 |
Product | transcriptional regulator |
Protein accession | YP_357592 |
Protein GI | 77919777 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.000038716 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATATA AAATCAGCGA AGTTGCCAAA ATGCTGGGGA TCACCCCCGA AGCCATCCGA TATTACGAGC AACAGAACAT CATAAAACCC TCTAAATCAG ATAGCAGCGG TTACCGAAGT TACAGCGTCT GGGATATGCA TGCCCTGCTC CACGCCCGTT CCTATCGCCA ATACGGGTTT ACTCTTTCGG AAACGGCCGA CCTCATCAAC AACTGCGACC TTGAAGACAT CATCGGCAAA CTTCAAGACA AAACGACCGA GCTTGAAAAA GAGGCCGCCT ATGCCTTGAG CCTGGTAAAA AGCATTCACC ACATGCAGGA AATCATGGCC GATGCCGAAA CCTTTATCGG CAAATACCGC ATCGAGCAAA GACCCGCTAT GTACCGCCTG GACAATGAAG ACCAATACGT GCTCATCAAA GACCCTCAAA TCAAAAAGGA AACCTGCAGG TGGATCGAGC ATGTACCGTT TGTATTTACA AGCGCGCGTT GGACCAAGGA AGAATACGAA CAAGGAGGAA AAAAACATTA CTTCGGTCTG TGCATCGAGG AGGAATTCGC TGATTTTTTA CCGGATGACC TCCCCCCATA CATCACTTAC CTGCCTTCCC GTTCTTGCGT TTATACCGTT ATACAATCCT GCCCGAGCAA AAGACTTACG CCGCAACGCC TGCAACCGGC CATTGCATAT ATGCGCGAGC AGGGCATGTC ATTAACCGGC GACATCATCA GTCGGGTTGT CAACTATCGC AAGACAACCG ACGAATATGT CAACTACCAC CAGGTCTGGC TGCCCTTCGA AGAATAA
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Protein sequence | MKYKISEVAK MLGITPEAIR YYEQQNIIKP SKSDSSGYRS YSVWDMHALL HARSYRQYGF TLSETADLIN NCDLEDIIGK LQDKTTELEK EAAYALSLVK SIHHMQEIMA DAETFIGKYR IEQRPAMYRL DNEDQYVLIK DPQIKKETCR WIEHVPFVFT SARWTKEEYE QGGKKHYFGL CIEEEFADFL PDDLPPYITY LPSRSCVYTV IQSCPSKRLT PQRLQPAIAY MREQGMSLTG DIISRVVNYR KTTDEYVNYH QVWLPFEE
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