Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2146 |
Symbol | |
ID | 3724838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 2497688 |
End bp | 2499367 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637751747 |
Product | two component signal transduction histidine kinase |
Protein accession | YP_357555 |
Protein GI | 77919740 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCCTCC ACCTTTTTGA TTCATCAACC TGTATGGATA GTCAACGGTT GACTCCACGG TTGATGCGCT GGTTCTTTGG ACTGCGCATG CTGGTTATCA GCCTGTTTCT CTGCGGTTCA ATTTTATTTC AGATTCGCGG TGACTCAGGG GCTCAGTGGA TTGTGCTCCG ATATTTATAT TTGCTCGTTG CTGTATCCTA TCTTCAGGCG ATGGTTTCAT TGGTTCTGGT GAAATATGTC GGGCCTCTGA GATGGTTGGC CCAGAGTCAG GTTGTCTGGG ACCTGGTCTT TGCCACATTT TTAATTTATC TTACCGGTGG TATTGCAAGT ATCTTTTCGT CATTTTATAT CCTGGTTATT TTGACCAGTG TCCTGCTTTT GTCCCGCAGG GATGTAATTC TAGTAGCCTC CGCTGCTGCC ATTCTTTATG GTAGTCTGAT AAACTTTCAA TATTATCGAC AGCTTCCACA GCTTCTTGGT GTTGTTTTTC CGACAGATGT CGGTGGGGCC GAAACACTTT ATACGCTATT TATCAATATT GTCGCGTTTT TGGTTGTCGG TATCCTCGGA GGTATTCTGG TTGGGCGTTT GCTTCACAGC GAGGATGTGC GGCAACAGAT CACCATCGAC TATGAGGAAC TAGAGCGGCT CAACCGTGCA ATACTGGAGA ACTTGACCAG TGGATTGGTG ATCGTGGATC GCCAATTGCG CATTCGGTCA CTAAATGCTG CCGCACAAGA GATGCTCGGT GGCTGTTTTA ATGAATTGTA CAATGCCACA ATTTCCCGTT TTTTCCCGGA CCAGATGTTC GTTCAAGAGG GACAATTCCA GGTGGTTTCC CGAGGGGAAG GCTGGCTTGT CGACCGGCAT GATTGTCGCC GTCCCATCGG TTACAATACA TCCATATTGA CCGATCCGGA TCGGCAGGTT GACGGGTTGC TGGTTACCTT TCAGGATTTG ACGGATCTTA AGGAAATGGA AGAGCGGTTG AAGCGCAGTG ACCGTTTGGC GGCCGTTGGT CAACTGGCAG CCGGGTTGGC ACATGAAATT CGCAACCCCC TGGCTTCGAT AAGCGGCTCC GTTCAACTAC TCAAAGAAAA TATTGCTCTT GGGGAAGAAG ATCGTAGCCT GATGAATATA GTGGTTAAGG AAGCGGACCG CCTCAATGGC CTGTTAAGGG AATTTTTGTT GTTCGCACGC CCTTCGCCTC CGGAAAAGCA ATGGTTTAGG GCCGAGGAGT TTGTCTCTGA GCTCGCTAAT TTATGTTCGG CAGATAAACG CTTTAACAAT ATCGATATTC AAAGGCATTG TTCTCCGGAT GATGAACTGT TAGGTGACAG AGGACAGTTG CGCCAGGCTC TGTGGAACCT CCTGATTAAT GCAGCTGAGG CCATGCCTGA TGGAGGTCGT TTGATATTCG ATTTTCTTCC GAATCCTCCG AGATTGGTGG TTAGTGATAC TGGGCCCGGA ATTCCTGAAT ATCTTCGACA GAAAATATAC GATCCATTTT TTACTACTAA GGACCATGGC ACCGGCCTGG GATTAGCAAC GGTACATAAT ATTGTCGAAG CGCATGGGGG GACTCTTGAG CTTCAAGGTA GCCAACAGGG CGGGGCCTCA TTTGTTGTTT GTCTGCCGGT TGATGAGGCT GATGTTCATG CGGATAGGGC TTCCTGCTGA
|
Protein sequence | MSLHLFDSST CMDSQRLTPR LMRWFFGLRM LVISLFLCGS ILFQIRGDSG AQWIVLRYLY LLVAVSYLQA MVSLVLVKYV GPLRWLAQSQ VVWDLVFATF LIYLTGGIAS IFSSFYILVI LTSVLLLSRR DVILVASAAA ILYGSLINFQ YYRQLPQLLG VVFPTDVGGA ETLYTLFINI VAFLVVGILG GILVGRLLHS EDVRQQITID YEELERLNRA ILENLTSGLV IVDRQLRIRS LNAAAQEMLG GCFNELYNAT ISRFFPDQMF VQEGQFQVVS RGEGWLVDRH DCRRPIGYNT SILTDPDRQV DGLLVTFQDL TDLKEMEERL KRSDRLAAVG QLAAGLAHEI RNPLASISGS VQLLKENIAL GEEDRSLMNI VVKEADRLNG LLREFLLFAR PSPPEKQWFR AEEFVSELAN LCSADKRFNN IDIQRHCSPD DELLGDRGQL RQALWNLLIN AAEAMPDGGR LIFDFLPNPP RLVVSDTGPG IPEYLRQKIY DPFFTTKDHG TGLGLATVHN IVEAHGGTLE LQGSQQGGAS FVVCLPVDEA DVHADRASC
|
| |