| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2143 |
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| Symbol | |
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| ID | 3724835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2494574 |
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| End bp | 2495131 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637751744 |
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| Product | pilin, putative |
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| Protein accession | YP_357552 |
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| Protein GI | 77919737 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 0.200029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGATGA TGTGTGTCAG CTCAAAGAAT AACAAAATTG GTGGTTTCTC CCTTATTGAA
CTGGTCATCG TTGTTTTTAT CCTCTCTGTT TTGGCAGCGG TTGCTATTCC CAAGTATCGG
GAACTTGTGG CCCGTGCCGA TAACGGTGCA GCTCTTGCGG ATCTCGGACA ACACTGCAAA
CTCGAAGCGG CTTTTATGGG AGACTTTTCA CAGTATGGAA GAACCAACAA TGCTGCTGCT
GCTGCTGCTC ATGGAGTCGG GGCGATTTTA ATCGGTCCGG CGGACAATAC CATGGTTATT
GCCTGTCCGG ATGGTTATGT CCGAGTGGGG CTGAGCAGTG GCGTCCATTT TTTATCCAAT
ACCCAGGCCG CCAACGGTTC CGGTTTCAGT GCCATTTTTA AACATGTAAG TGGAACACGG
ATTTATGGTG TTGATAGTGA TACTTTCGGT ATTTTTCAGA TCCCCGGCGT CTCGGGGCAG
ACCTTGCTGG CATCGGGGGC CAACGTAGCG TCAACTGCTG GTGATGATTT CAGTGCTGCA
GGATGGCAGC ATTTTTAG
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| Protein sequence | MSMMCVSSKN NKIGGFSLIE LVIVVFILSV LAAVAIPKYR ELVARADNGA ALADLGQHCK
LEAAFMGDFS QYGRTNNAAA AAAHGVGAIL IGPADNTMVI ACPDGYVRVG LSSGVHFLSN
TQAANGSGFS AIFKHVSGTR IYGVDSDTFG IFQIPGVSGQ TLLASGANVA STAGDDFSAA
GWQHF
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