| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2082 |
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| Symbol | |
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| ID | 3724773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2425689 |
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| End bp | 2428370 |
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| Gene Length | 2682 bp |
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| Protein Length | 893 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637751683 |
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| Product | RND superfamily exporter |
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| Protein accession | YP_357492 |
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| Protein GI | 77919677 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR03480] hopanoid biosynthesis associated RND transporter like protein HpnN |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCCC GCATACAGGA AAAATGCCTG ACCGGTCTCT GGCGTTTCAT ATCCCGCGCA
CCGCGCACCA TTGTCTGGTG CGCGGTACTG TTGGCCGCCG TCGCGGCTCT GGTTTCTGTG
CTTTTTTTAC GTCTGGACAG CGATCAGGAT AAACTGGTTT CGCAGGATTT ACCCTATCAG
CAGCGTTATC TCGAGGTACT CAGGAACTTT GGTGATCAGG AGTATCTTTA CGTGGTCGTG
CAGGCGGATG AAGGCGCATC GGGCAAACGC AGTGCGGAAC GGTTTGCCGA GGCTCTGGCT
ACCCGCCTGG GGGCCTATCC CGATCAGATT CAGGAAATTC ACTACCGTAT AACCGCCCAG
GACCTCGGGC CGGGTGCCCT CTATTTCGCT TCCCTCGATG AAGCGCAAGG TTTGACCGAT
ATGGTCGGGG CGATCGGTCC TTTGGCTACG GACTGGCTGC ACAGCGGCAA ACTGCCCGAT
CTGATTGAGC GGGTCAGCGG CTTGTTCGGC GGCGGCAGGC AGGATGGCGA GACGGCCGAT
CCGAGTCTGT TGGGCCCGGC GCTTGAAGGT CTCGACGGTT TCGTTACCCG TATTGATCAG
ACACTGGCCG GTGAGCCTGC CGAAGGCCCG GTATTCGATG TGGCGGATCG CGGTGTGCAT
TATTTCTTTA CCGCCAACGA GCGTTTGCTG ATCATGCGTT TGCTGCCGGT CAAGGATTAC
AGCACCATGG ACGTTATCGC CGGTCCACTG GCTACGGTTC GTGAAGCCCT GCAGCAGACC
CGTGCGGAAT TTCCCGCCAT ACAGGCCGGG CTGACCGGCC GCCCGGTGCT GCAGGCCGAT
GAAATGGTCA CCACCAACCG CGATATGATG CGCGCTTCGA TTCTTTCGGT GATCCTTGTC
GGATTGTTGT TTACGTTGGT GTTGCATGGC TGGTTGCGCC CGGTGCTGGT TATTTTCTGT
CTGGTTCTGG CCTTGGCCAT GACTTTCGGT TTTACCACCG TAACCCTTGG CGTACTCAAT
CTATTATCCA TTGTGTTCGC TCTGGTGCTG GTCGGTATCG GGGTCGATTT CGGGGTACAT
GTGGTCATGC GTTACGTGGA AGAGCGCAAG GCCGGCAACG ATGTCGAAGA CGCGGTGCGA
ATTTCTCTGA TGCATACGGG CCCCGGGGTC ATTCTTGGCG CGATCACTTC GGTCTGCGCC
TTTTACGCCG TGGTCTGGTC CGATTTTACC GGTCTGGCCG AACTTGGACT TATCGGGGGT
ACCGGTATCC TGCTGTGCCT GGTGGTGATG TTGACGGTAC TGCCGGCCTT GTTGCTTATG
GCCGGTCGGC GTAATCTTTT TCCCAAGTCG ATGCCGCAGA TCACCACCGT GCCCCTGATT
GGACGATTGT CGGCCCGTCC CGGTCGTCTG CTGACGGTGG TTGTCCTGGT GACCCTGCTG
TTGCTGCCGG GGCTTTTCAA AGTGCGCTTC AATTACAATC TGTTGGAGCT GCAGGCCGAG
GGATTGGAAT CGGTGCGTTA TGAAAAACGC ATGATCGAAG ATTCCGACGA GTCGACCTGG
TATGCCGTTT CGGTGGCGAA CGATGTCACT CAACTCAACC GTCTGCGTGA GCAATTCAAG
GCCCTGGATA CGGTGGGCAA AACGGAAAGT CTCAGCGATT ATCTGCCGCA AAATCAGCAA
CGTAAAGCGG CGTTGTTCAG ACAGGCCGCC GCTCGCCTCG GCAATCTGCC GACGGCACCT
GGAGCTGCGG GCCCGGTGGA TGCACAGCGC ATGCTGGATG CTCTGGATAG TTTGTCGGGG
GCTCTGGACA ACCTGGCGGA GAAACTTTTT GCCGCCGGTG CCGGTGACGA GCTGGCCCAG
CTTGACGCCC TTATCGAGAA GCTCGATTCC GCCTACGCCA GGCTTGCAGA TAATCGGGCG
TTGGCTGCGC GTTTGACGCC ATTGCAGACC CAGCTGCAGG CCGATGTTTC AAAAGGCCTG
CGCCAGTTGC AGATCTGGCT TTCGGCTTCC CCCGTCGGCA TGGACGAACT GCCGGCGTTT
CTGCGGGGTT TGTATGTCGG TCGTGACGGT GCCATGCAGA TCAAAGTTGT GCCCAGCCAG
GACATCTGGA AGTTCAAAAA TCTGCGTACC TTTGTCGCGG ATCTGCGCAA AGTGGACGCA
CAGGTCACCG GGGTACCCAT CAGCGTGTTT GAATCGGCTC GTCTGATGAA GCATACCTTT
GTGTTTTCCG CGCTGCTTAC TCTTGTTCTG GTCAGTCTGT TGTTATGGTT CAATGCCCGC
AGTATGCGGT ATATTCTGCT GGCCTTGTTG CCCCTTTCGG TGGGCATGAT CTGGCTGTTG
TCGCTGATGG GCTGGCTGGG ACTCAATTTC AATCTTGCCA ACTTCTTCGC GATCCCCATC
CTGATTGCTA TCGGAGTCGA TGGCGGGGTG CATTTTCTCG CACGCTGGAA GGAACTTGGC
AACGGTTGTC TGTTTCAGAC CAGTACACCC ATGGCTGTCA CATTGAGTTT CGCTACCACC
ATGATCGGTT TCGGAGGACT GCTGTTTGCC CATCATCGCG GTCTGGCGAG TCTCGGTTGG
GTTATGGTGC TGGGCTCGCT GACAGGCATG TTAAGCTGTC TGCTGGTACT GCCGGCGGTG
CTCAAAGTCA TCCGTTATGG GGCAAACCAC GATAAGGAGT AA
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| Protein sequence | MFSRIQEKCL TGLWRFISRA PRTIVWCAVL LAAVAALVSV LFLRLDSDQD KLVSQDLPYQ
QRYLEVLRNF GDQEYLYVVV QADEGASGKR SAERFAEALA TRLGAYPDQI QEIHYRITAQ
DLGPGALYFA SLDEAQGLTD MVGAIGPLAT DWLHSGKLPD LIERVSGLFG GGRQDGETAD
PSLLGPALEG LDGFVTRIDQ TLAGEPAEGP VFDVADRGVH YFFTANERLL IMRLLPVKDY
STMDVIAGPL ATVREALQQT RAEFPAIQAG LTGRPVLQAD EMVTTNRDMM RASILSVILV
GLLFTLVLHG WLRPVLVIFC LVLALAMTFG FTTVTLGVLN LLSIVFALVL VGIGVDFGVH
VVMRYVEERK AGNDVEDAVR ISLMHTGPGV ILGAITSVCA FYAVVWSDFT GLAELGLIGG
TGILLCLVVM LTVLPALLLM AGRRNLFPKS MPQITTVPLI GRLSARPGRL LTVVVLVTLL
LLPGLFKVRF NYNLLELQAE GLESVRYEKR MIEDSDESTW YAVSVANDVT QLNRLREQFK
ALDTVGKTES LSDYLPQNQQ RKAALFRQAA ARLGNLPTAP GAAGPVDAQR MLDALDSLSG
ALDNLAEKLF AAGAGDELAQ LDALIEKLDS AYARLADNRA LAARLTPLQT QLQADVSKGL
RQLQIWLSAS PVGMDELPAF LRGLYVGRDG AMQIKVVPSQ DIWKFKNLRT FVADLRKVDA
QVTGVPISVF ESARLMKHTF VFSALLTLVL VSLLLWFNAR SMRYILLALL PLSVGMIWLL
SLMGWLGLNF NLANFFAIPI LIAIGVDGGV HFLARWKELG NGCLFQTSTP MAVTLSFATT
MIGFGGLLFA HHRGLASLGW VMVLGSLTGM LSCLLVLPAV LKVIRYGANH DKE
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