| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1939 |
|---|
| Symbol | |
|---|
| ID | 3724629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 2253985 |
|---|
| End bp | 2254710 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637751540 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_357350 |
|---|
| Protein GI | 77919535 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCCGTA GACTCGAAGC CAAGGATCTT TGGAAGAGCT ATCGCGGCCG CGGTGTCGTG
CGGGGCGTGG ATCTGGAAAT CCGTTCCGGG GAGGTCGTCG GTCTGCTCGG GCCCAACGGT
GCGGGAAAGA CAACCTCATT TTATATGGTT GTCGGTCTTA TTCGCCCCGA TCGGGGACAG
GTGCTTCTCG ATGAGCAGGA CCTGACCGGG ATGCCGATGT TCCAGCGAGC CCGTGCAGGT
ATATCTTACT TGCCTCAGGA AGCCTCGGTT TTTCGGAAGC TTACGGTCGA GCAGAATCTT
CTGGCGATCC TGGAAACCGT CGACAGTGCT GCCGGGCAGC GTAAACAACG CGCCCACGAT
TTGATCGAAG AATTTCGCCT GCAGCATGTG GCACGCTCAC CCGGTTATGC GCTTTCGGGG
GGAGAGCGTC GTCGATTGGA GATTGCGCGC GCTTTGGTCA TCGATCCCGG ATTCATCCTT
CTGGATGAGC CTTTTGCCGG TATCGATCCG TTGGCTGTGC ACGATATTCA GAACATCATT
TGTCGCTTGC GTGAGCGAAG GATTGGTGTG CTGGTGTCCG ATCACAATGT GCGGGAAACT
CTCGGAGTCT GTGACAAGGC CTATATCTTG AGTGACGGCC AGATTCTGGC TTGCGGCGAT
CCGGAACAGA TTGCTTCCTG TCCGGAAGTA AGAGCGACCT ATCTTGGCGA AAAATTCCGT
TTATAA
|
|---|
| Protein sequence | MSRRLEAKDL WKSYRGRGVV RGVDLEIRSG EVVGLLGPNG AGKTTSFYMV VGLIRPDRGQ
VLLDEQDLTG MPMFQRARAG ISYLPQEASV FRKLTVEQNL LAILETVDSA AGQRKQRAHD
LIEEFRLQHV ARSPGYALSG GERRRLEIAR ALVIDPGFIL LDEPFAGIDP LAVHDIQNII
CRLRERRIGV LVSDHNVRET LGVCDKAYIL SDGQILACGD PEQIASCPEV RATYLGEKFR
L
|
|---|
| |