Gene Pcar_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1874 
Symbol 
ID3724564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2189845 
End bp2190186 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content50% 
IMG OID637751475 
Productanti- anti-sigma regulatory factor 
Protein accessionYP_357285 
Protein GI77919470 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00000000307887 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTC AGATAAATGA GCGCGGCGAT ATCGTATTGA TTTCGGTAGA TGAGGAGCGC 
CTCGACGCCC ATAACAGCAC CGACCTGAAA ACCCGTCTTT TATCTCTTTT CGAAGACGGA
AAAAACAACA TGGTCATCAA TCTTGAGGGG GTGCGATTCG TCGACTCTTC CGGCCTGGGC
GCTTTGGTGT CCGGATTTAA AAATGCCAGT GCCAGGAACG GAAGCCTCAA ACTTTCCAAC
CTGCAACCGC AGGTGCAATC GATGTTCGAA TTGACCCGCC TGCACCGCGT ATTTGAGATT
TTCCCCAATT CCGAAGACGC TATAGCGAGC TTCCAGGCCT GA
 
Protein sequence
MNIQINERGD IVLISVDEER LDAHNSTDLK TRLLSLFEDG KNNMVINLEG VRFVDSSGLG 
ALVSGFKNAS ARNGSLKLSN LQPQVQSMFE LTRLHRVFEI FPNSEDAIAS FQA