Gene Pcar_1863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1863 
Symbol 
ID3724553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2177645 
End bp2178088 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content53% 
IMG OID637751464 
Productthioesterase 
Protein accessionYP_357274 
Protein GI77919459 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00000000102626 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTTTGA AGGATTTTCG ATTTACCATG CCCTACAAGG TGCGTATCGC CGACATCAAT 
TACGGTGGAC ATGTTTCCAA TGCCGCGGTG CTGAGTTTCT TTCAGGATGG CCGTATCGGT
TATCTTGCGC AGTTGGGTGA CTTCAGCGAA ATGGACATCG GCGGTTGCGG CATTATATTG
CCCGAAGCCC ATACCCGCTA CCGTGCCGAA ATGTTTCTCA ATGATGAGTT GGTCATCGGC
GTACGGGTGG AAAGTATGAA AAACTCATCG TTCAGCATGG CTTATCGCAT CGAAAGGGAT
GGTGTTGTAA CCGCCGAGGG CACTACGGCA TTGGTCGCTT TCGATTACCA GCAACGCCGT
CCCTGCCGTC TGCCTGACGC CTTTCGCAAA GCGGTGGTCG TGCATGACGG TCTTGACGAT
GATCGGCCCG GTGAAAGGAG ATGA
 
Protein sequence
MLLKDFRFTM PYKVRIADIN YGGHVSNAAV LSFFQDGRIG YLAQLGDFSE MDIGGCGIIL 
PEAHTRYRAE MFLNDELVIG VRVESMKNSS FSMAYRIERD GVVTAEGTTA LVAFDYQQRR
PCRLPDAFRK AVVVHDGLDD DRPGERR