Gene Pcar_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1801 
Symbol 
ID3724490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2103795 
End bp2104901 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content36% 
IMG OID637751403 
Producthypothetical protein 
Protein accessionYP_357212 
Protein GI116878549 
COG category[S] Function unknown 
COG ID[COG2327] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCGG CGTTTTTATA CGGATACTAT GGAATGAAAA ATACGGGAGA TGATGCTCTT 
CTTTCTGTTT GCAACTGGGG GGTACGAAAA TATTTAAAAG TCCAAAAGGT GTTCGCAACC
TCTACGAAAA TAAATAATCC ATACCTAGGG GATGGGTTTT CTCCTGTTTA TAGATCGAAA
GTTTTCCTTC GTGGTGAGAA TAGTTTGCGT GCTTATTTAG CTGCTTCCCT TTCGAGTTCT
GTTGTTTTTG GTGGTGGATC GGTTTTTCAT ACGGCAAAGT ACATTAACAA AATGGCTCAA
TTTGTCAAGT TTGCTGGGAA GGGGTTGCAT TTTGCTGTTG GTGTTGGTGT TGGGCCATTT
CGTGATCTAA ATGCTGAGCG TGCCTGTGCT AAATTATTTA ATAATCTAAG CTTTGTAGGT
GTCCGTGACC AGTTGAGTTT CGATATTGTA ACAGATATTT GCCCTAATAT TAGGTGTGAA
AAAACTTTTG ATCTTGCACC GCTATTACCA CTTTTGTCTT CTAATAATCT TAACTCAAAA
ATCAATACTC AACCTAAAAA GGGTATAGGT TTTGCTCTAT GTGATTACGA AAGTTTTGTC
GGAGGGGATA CAAAACGAGA AATTATACGT AGAGAAAAGA TAAAAAAGTT TATTGACTTG
TTGGACCCTA ATGAAGTCCA AGAGTTGATA TTTATCGACT TTAATGGTCA CTACAAATTT
GGTGATCATA AAATTCATAA TGAAATTATA GGTAAGATTG ATAAGAGGTT CAAAGTAACC
CACATCTCCT ATCATTCGAA TCCAGGTATT GCACTTCGAG CAATATCTAA TCTTCGAGCA
ATGGTTGCTA TGAGGTTGCA TTCAGCTATT TTTTCTTATG TAGTTAATAT ACCTTCTATT
ATACTGAGTT ATCATGAAAA ATGTAATCAA TGGGCAAATG ATATTGGTGT TCCATCCAGT
TGTTTATTTG ATAGTGTTTC TTTTGATCCA TCTGAATTAT CCGATTCTGT TAGATTGATT
TTAGATGGAA AAATCCCAGG GCCTATTTTG AGTCCTAGCA AGGCATTGGA GTTAGCCTTT
AAAAATTGGA CATGGCTTGA CGAATAA
 
Protein sequence
MNAAFLYGYY GMKNTGDDAL LSVCNWGVRK YLKVQKVFAT STKINNPYLG DGFSPVYRSK 
VFLRGENSLR AYLAASLSSS VVFGGGSVFH TAKYINKMAQ FVKFAGKGLH FAVGVGVGPF
RDLNAERACA KLFNNLSFVG VRDQLSFDIV TDICPNIRCE KTFDLAPLLP LLSSNNLNSK
INTQPKKGIG FALCDYESFV GGDTKREIIR REKIKKFIDL LDPNEVQELI FIDFNGHYKF
GDHKIHNEII GKIDKRFKVT HISYHSNPGI ALRAISNLRA MVAMRLHSAI FSYVVNIPSI
ILSYHEKCNQ WANDIGVPSS CLFDSVSFDP SELSDSVRLI LDGKIPGPIL SPSKALELAF
KNWTWLDE