| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1755 |
|---|
| Symbol | |
|---|
| ID | 3724444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 2052975 |
|---|
| End bp | 2053940 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637751359 |
|---|
| Product | Flp pilus assembly protein TadD |
|---|
| Protein accession | YP_357168 |
|---|
| Protein GI | 77919353 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 68 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAATC CGACTATTAC GCCTTGCCTT ACCTCCGCAC CCAGGGCGGC CACAGGCTTG
TTGTGCTCTT TACTGCTTAT ATGCATGGTG GCTTGCGCGC CTGTCGCAGA TCCCTACCAC
CAGAGAATTG CTAAACTGAC CGTTCTGGAA AACGGAGACG ACGACTCCTT CAAGGAAAAA
ATAGCCGATC TTCCGGCGGA AGATTTAACC GAAAAAGGCA ATGTATACCT TAACCAGGGA
AATCTGGAGC TGGCAAGACT GCACTTCTCC GCCGCCCTCC AAAAACAGCC GGAATTCCTC
CCTCCCCTGG CTGGCATGGG GCAGGTTTTC TTCAAACGTG GCAATACAGC CAGGGCCCGG
GAGATCTTCA ATACGGTTCT TGAAAAAGAC CCGCAAAATA TGGTTGCGAT GCTCGGCCTT
GCCAGACTGG CCAGAAGTCG TGGCGATTAT GCAACAGCCG AAACATTGCT GGAGAGGCTC
TATGCTCTCC ATCCCGAAAA CCCGCTGATC ATGAGTGAAC TGGCCATAAC CTATGACAGT
ATCGGGCAGG ATAGACTCAT CAAAGCCGAA CCTTTACACA AGCAGGTTCT GGAACTACAA
CCGGACATAC CGGCCGGATA TAACAACCTC GGTTTCAATT ACCTTCTTCA GGGGCTTTAC
AGCGAAGCGG TTCCCTTCTT CTCCAAAGCT CTGGCCATCG ATCCTGCCGA TGTGCGTGCA
AAGAACAATC TCGCAACGGC TTTTCTGCTT AACAACGAAG AGATACGTGC TTTACAACTT
TTCGAGGACA CCCTTGGCAA GCCTGCCGCT TACAACAATA TCGGTTACCT GTACATGACC
CAGGGGAACT GGGACAAAGC GGAGAGATCT TTCCGGAAAG CCCTGGAACT CAATCCGGTT
TTCTATCTGC GCGCCCAGCA AAACCTTGAG CGCCTCAATA GCCTGCGCTC CCAGCCGGCA
GACTGA
|
|---|
| Protein sequence | MKNPTITPCL TSAPRAATGL LCSLLLICMV ACAPVADPYH QRIAKLTVLE NGDDDSFKEK
IADLPAEDLT EKGNVYLNQG NLELARLHFS AALQKQPEFL PPLAGMGQVF FKRGNTARAR
EIFNTVLEKD PQNMVAMLGL ARLARSRGDY ATAETLLERL YALHPENPLI MSELAITYDS
IGQDRLIKAE PLHKQVLELQ PDIPAGYNNL GFNYLLQGLY SEAVPFFSKA LAIDPADVRA
KNNLATAFLL NNEEIRALQL FEDTLGKPAA YNNIGYLYMT QGNWDKAERS FRKALELNPV
FYLRAQQNLE RLNSLRSQPA D
|
|---|
| |