Gene Pcar_1745 details

Gene Information

• Locus tag: Pcar_1745
• ID: 3725946
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 2042981
• End bp: 2043589
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637751349
• Product: Flp pilus assembly protein, protease CpaA
• Protein accession: YP_357158
• Protein GI: 77919343
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4960] Flp pilus assembly protein, protease CpaA

Plasmid Coverage information

• Num covering plasmid clones: 72
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACTA CTCATGCTAT TAAAATGACA CGCTGTGCTT TTGGCCTGGT GGCCATGTCG 
CTGGCCATGT TGTTTATTTA TCGACATCCA TCGGATATGG TCATTCTGGC TGCCTCGGGT 
TATTTGTTCC TGATCTGTGC AACCGACACC CTTTATTCAA AAATCCCTAA CATCTGCACT 
CTGGCCTTGA TTACCATCGG GCTGGTTACC AACATTGTCA TCTCGGGCTT GCCCGGCATT 
ATCGTTTCGA TAACGGGATT TAGCGTGGGC CTTGCGTTGC TCCTGATCCC CTTCTTGCTG 
GGAGGGATGG GAGCCGGCGA TGTCAAGGCA CTGGCGGCGC TTGGCGCTCT GCTGGGACCA 
GGCAAGACCT TTCAAATATT TCTGTATATG GGACTTATCG GCGGCCTTTT GGGGATTATT 
TTTCATCTTA TCTCGACGGA TACCCGCAAA GAACTTCGCC ATTATGCTTC CATGCTCAAA 
AATGTTTATC TCACAAGAGA TTACACATCC TTTAAAAACT ATGAAAGTCG CTCCACATAT 
CGGTTTCCTT ATGCAACAGC CATCGCATTC GGATTTTTTG CCCTGACCTC TTGGGGTGAC 
ATCGTGTAA 

 

Protein sequence

MTTTHAIKMT RCAFGLVAMS LAMLFIYRHP SDMVILAASG YLFLICATDT LYSKIPNICT 
LALITIGLVT NIVISGLPGI IVSITGFSVG LALLLIPFLL GGMGAGDVKA LAALGALLGP 
GKTFQIFLYM GLIGGLLGII FHLISTDTRK ELRHYASMLK NVYLTRDYTS FKNYESRSTY 
RFPYATAIAF GFFALTSWGD IV