Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1625 |
Symbol | |
ID | 3724325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 1900212 |
End bp | 1900742 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637751220 |
Product | nitroreductase |
Protein accession | YP_357039 |
Protein GI | 77919224 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.0106837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCATGG AATTACTGCG CAAGCGTCGC AGTATCCGCA GCTTCGATCA ATCTCCGATT GAAGAAGAAA AAATTGACCT TCTCGTTGAA GCTCTGCTTC GTTCGCCGAC TTCCAAGGGG CGTCACCCCT GGGAGTTTGT TCTGGTCACC GACCCCGATA TTATCGCCAA CCTGGCTTCG GTAAAACCCA AGGGCGCCGG TTTCCTTGCC CGAGCTCCGT TATGTATCGT CATCTGCGGC GATCCGGGTG TCAGCGATGT CTGGGTGGAA GATTGTGCGG TTGCCGCAAC TATTGTTCAA TTGGCTGCCG AGGATCTCGG GTTGGGCAGC TGCTGGTCGC AAATTCGTCG TCGGCAACAC CAAACAGGGG TCTCTTCGTC AAGTGTGGTG CGCCATCAGC TTGGATTGCC TGAACATCTT GAGGTCGCGT CCATCATCGG CATAGGTTAC CCCTTGGCAA CGATCGCGGC TCATGGCGCC AATGATTTTG CAGACGATAA AATTCATAGA AATACCTACC GGAACAGATG A
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Protein sequence | MFMELLRKRR SIRSFDQSPI EEEKIDLLVE ALLRSPTSKG RHPWEFVLVT DPDIIANLAS VKPKGAGFLA RAPLCIVICG DPGVSDVWVE DCAVAATIVQ LAAEDLGLGS CWSQIRRRQH QTGVSSSSVV RHQLGLPEHL EVASIIGIGY PLATIAAHGA NDFADDKIHR NTYRNR
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