| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1624 |
|---|
| Symbol | |
|---|
| ID | 3724324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 1899613 |
|---|
| End bp | 1900143 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637751219 |
|---|
| Product | nitroreductase |
|---|
| Protein accession | YP_357038 |
|---|
| Protein GI | 77919223 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 0.101829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACTGT CTTTACTTAA AAAACGACGC AGCGTAAGGA AATACCAGCC ACGCCCCATA
GAAAAAGAGA AGATCGACAT TCTTGTCGAA ACCCTGCTGC GATCTCCCTC CTCCAGAAAT
CTCAATCCCT GGCAGTTCGT TTTCGTCACG GAACCAGGGC TGCTCGCAAA ACTCGCTCGA
AGCAAAGAAC ATGGAGCCGC CTTTCTTAAA GGTGCAGCTT TGGCCGTGGT TGTATGTGCC
GATCCGCAAC GCTGCGATGT ATGGATTGAA GATTGCTCCA TTGCTGCAGC CAATCTTCAG
CTTGTAGCCG AAGAAATGGG TCTTGGAAGC TGCTGGGTGC AGATCAGGTT GCGACAACAC
AGCAGTCGCA GTGCAGCCGA GGATTATATA AAGGAATTGC TGCAGATACC CGAGGATCTT
GTTGTGGAAT CGATTATCAG CCTCGGCTAT CCTGACGAAT CCAAACCGGC CCATTCCGCC
GAATCGCTTC AACATGACAA GATTTTCTTT AATATCTATG GCCAAAACTG A
|
|---|
| Protein sequence | MLLSLLKKRR SVRKYQPRPI EKEKIDILVE TLLRSPSSRN LNPWQFVFVT EPGLLAKLAR
SKEHGAAFLK GAALAVVVCA DPQRCDVWIE DCSIAAANLQ LVAEEMGLGS CWVQIRLRQH
SSRSAAEDYI KELLQIPEDL VVESIISLGY PDESKPAHSA ESLQHDKIFF NIYGQN
|
|---|
| |