| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1576 |
|---|
| Symbol | |
|---|
| ID | 3724276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 1843183 |
|---|
| End bp | 1843953 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637751171 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_356990 |
|---|
| Protein GI | 77919175 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 91 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGATC AAAGGGAGAC GGTTCAGCGT TGGCCACACC AGTTGCATGG TTCGCTGGTC
ATCCTTAAGA AGAATGCGCG ACTGTACTAT CTGAAGCCGC CGGTGCTTAT CTTCGGGGTT
CTTTTTCCAG TTTTTTTCTT TCTTGCGTTC AAGATGGGCC GTCCTATCGC GACAGGAAAT
ATTGTTCCAG GCATGGTTGC TATGGCACTT TGGTTTACTT CCAGCGCGGT CGGACCATTG
GTAACTCCCT GGGAACGGAG CGGCAAGACT TATGAACGTC TGATATCAAC GCCTGTTGCG
CTGCCCGCGA TACTGGCGGG AGACGTCATT AGCGGATTCA TCTTCGGAGC CTGTTTTTCG
GCAATTCCGG TTTTACTGGG GCTTGTTCTT ACCGATGCCT CTGTCAGGAA CATGTCGCTG
CTTATTGCTG GAATCATCAT ATCTGCACTG AGCTTTGCTT CTTTAGGGGT GCTTCTGTCT
TCATTCCCTG CAAGAACCCC CTCTAACACC ATGCTGCTGT CGAACCTGGT GCGACTCCCG
CTGCTTTTTG TGAGTGGAAT ATTTATACCG ATTGCCAAGA TGCCTGTTTG GGCCCGGTGG
CTTGCACCGA TTTCACCGTT ATCCTATGCC AGTTCATTGA TTCGCTCTGG TTTCGGGCAA
TCGGCGTATT TCCCCGTTTG GCTGAACTTC TTTATGCTGG TTTTGTTTAC GGTGACAATG
TTTCTGGCGG CCTGCAAATT TCACAATATT TGGCGGGGGA AAGGTTTGTG A
|
|---|
| Protein sequence | MTDQRETVQR WPHQLHGSLV ILKKNARLYY LKPPVLIFGV LFPVFFFLAF KMGRPIATGN
IVPGMVAMAL WFTSSAVGPL VTPWERSGKT YERLISTPVA LPAILAGDVI SGFIFGACFS
AIPVLLGLVL TDASVRNMSL LIAGIIISAL SFASLGVLLS SFPARTPSNT MLLSNLVRLP
LLFVSGIFIP IAKMPVWARW LAPISPLSYA SSLIRSGFGQ SAYFPVWLNF FMLVLFTVTM
FLAACKFHNI WRGKGL
|
|---|
| |