Gene Pcar_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1523 
Symbol 
ID3724222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1784973 
End bp1786136 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content44% 
IMG OID637751119 
Productglycosyltransferase 
Protein accessionYP_356939 
Protein GI77919124 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones75 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCGGA AGTTTCGAAT ATCTTTTGTG ATTACCGGCC TTGGCTCTAA TGGCGCTGAA 
ATGATGCTGT TGAAGTTGTT GTCCAATATC AACCGAGATG TTTTCGAACC TAAAGTCACC
TCCCTACTTG CTTACGCTAC ACTACGCGAA AAATTTGAAC AGATAGGCAT TCCGGTCACC
GTTCTCGGTT TGAAACCCGG AATCCCTGAT CCAAGAGGCC TATTTAAACT GATACACATG
TTTAGGAAGG ATAAACCGCA ACTGGTTCAG ACGTGGATGT ATCATGCCGA TCTCGCTGGC
GGATTGGCAG CGAAATTGGC AGGAAATATT CCAGTCGTAT GGAATATTCG TCATAGTAAT
CTCGATCCTG AGGTTGATAA AAAAACAACT GTGTGGACAG CCAAAGTATG CAGTCGTATA
TCTTCTGTTT TGCCTCATAA AATCATATGT TGCGCTGAAA AGGCTAAAAA TATTCATGTA
AAGCTGGGTT ATGACGCTAA AAAAATCGTT GTTATTCCTA ATGGTTTTGA TTTGTCTCAA
TTTTCATTTG ACACTCATGC AAAAGATTCA ATAAGAGCGG AATTATCCAT CCCAAACGAT
TCGATAGTTA TCGGGTTGGT GGCTAGGTAT CATCCTCAAA AAGACCACGA TACCTTTTTT
AAAGCTGCGG ATTTGCTTAA ACGACGTTTT CCCAATGTCC ATTTTGTTCT TTGTGGATAT
GATATTACCC GGGAAAATCC TGATCTTCTT CGTTCCATGA GTGGAAAAAA CCTTGATGGC
TCTGTACATT TGCTCGGTCT GCGAAAGGAT ATTTCTGCGG TTACGGCAGC TTTCGATATC
GCAACTTCCT CTTCACGTTG CGGAGAAGCC TTCTCCAATA CGATAGGTGA GGCGATGGCG
TGTGGTGTGC CTGCTGTGGT GACGGATGTC GGAGATTCGG CTTATATCGT GGGGGAGACA
GGCAGGATTA TATCTCCGGG TCAGCCAGAG GACTTGTGCC GTGCCTGGCA GGAATTGATC
GATCTTGGGC AGAAGGGTCG TGCCACGTTG GGTGCTCTCG GTCGACAACG CATACAGGAC
CGGTTCTCTG TTGATAAAAT TGCTCGGCAG TATGAAAAAA TCTATTCCGA TATCCTTTGT
CCGAACATGG AATCTAAAAG CTGA
 
Protein sequence
MNRKFRISFV ITGLGSNGAE MMLLKLLSNI NRDVFEPKVT SLLAYATLRE KFEQIGIPVT 
VLGLKPGIPD PRGLFKLIHM FRKDKPQLVQ TWMYHADLAG GLAAKLAGNI PVVWNIRHSN
LDPEVDKKTT VWTAKVCSRI SSVLPHKIIC CAEKAKNIHV KLGYDAKKIV VIPNGFDLSQ
FSFDTHAKDS IRAELSIPND SIVIGLVARY HPQKDHDTFF KAADLLKRRF PNVHFVLCGY
DITRENPDLL RSMSGKNLDG SVHLLGLRKD ISAVTAAFDI ATSSSRCGEA FSNTIGEAMA
CGVPAVVTDV GDSAYIVGET GRIISPGQPE DLCRAWQELI DLGQKGRATL GALGRQRIQD
RFSVDKIARQ YEKIYSDILC PNMESKS