Gene Pcar_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1486 
Symbol 
ID3723783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1738161 
End bp1739582 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content60% 
IMG OID637751079 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_356902 
Protein GI77919087 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA AAGTCGACGT CATAGTTATC GGGGCGGGCA GCGCCGGGCT AGCCGCCGTG 
CGGCAAATAG AAAAAACCAC CGACAATTAT CTGCTCATCG ACCAGGGTCC GCTGGGCACC
ACCTGCGCCA GGGTGGGATG CATGCCGTCC AAAGCCTTTA TCAAGGTGGC CAGGGACTTC
CATGGAGCAA CCCGCCTGGC TCAGGCCGGG CTGACAGGCA CCGCCCCTGC CGACTGCGAT
ATTCCCGCCG TGCTCGAACA TGTGCGCCGG TTGCGCAATC GTTTCGCTTC CGGCATGGTG
GAGGTTACCC GCAAACTTGC CGGAGACCGT TTGATCAAGG GGGCTGCACG CCTGCTCGGA
CCGAACCGCG TGTTGGTCAA CGACGAAGAA ATCACATGCT CCAGCATCAT TCTGGCAACA
GGGTCACGCC CCACCATACC GGAGGCCTGG CGGGGATTTT CCGATCGGAT TCTGACCGCC
GACACCTTTT TCGAGCAACA GGACCTGCCG CGCCGTATCG CGGTGGTCGG CCTCGGCATT
ATCGGTCTGG AACTCGGTCA GGCCCTGGCC AGACTGGGCA TCGAAGTCAC GGGATTCGGC
CGCAATCCGC ATATCTGCGG CATCCGCGAT CCGGAAATCA ATCGCGTCGC CCTGGAGACA
TTGGGCCGGC AATTCCCTCT TCATGTCGGC GATGAAGCGG AAATGACGCC CGCGGGAAAA
ACCCTCCGCA TCCGTAACGG CTTTCACGAA GTCGAAGTCG ATGCCGTCAT CGCCGCCCTC
GGCGTAACCC CCAACATGGA TAACCTCGGA CTGGAAAATC TCGGCGTCCC GTTAGACGCA
CGCGGCCTGC CGCCCTACCA TCCCTACACC ACGCAGATTG GTGATCTGCC GGTCTATGTT
GCGGGCGACG CCAACGGCTG CCTGCCGATC CTGCATGAAG CGCAGGACGA GGGATTCATC
GCCGGACGCA ACGCAACGGG AACCCAGATA CAGAAATACC GCCGCCGCGC CGGTCTCAAA
ATCGTTTTCA CAGATCCGCA GGTCGCTGCT GTCGGCCAGA CCCTGAATAA ACTTGAAGAC
GCCGACATCA TTGTCGCCCG CGCCGATTTT TCAGAGCAAT CCCGCGCCAT CGCCGAAGGC
CGCAACGCCG GTCTCATGCA CCTGTACGTG AATAAGGCCG ATGCCCGTAT CCTCGGCGGT
GAAATGATCG TCCCCGACGC CGAGCATCTC GCCCAACTGT TGGCCCTCGC CATCCACCGG
GAGATGACGG TGCACGACAT GCTGACCATG CCTTTTTATC ACCCCACCGT CGAGGAAGGA
TTACGCACGG CATTGCGCGA CGCCGCCCGG CAATTGCACC ATATGCATAG CAAAGAAGAA
CTGACACTCT GCGAAAGTTG CCCCGAACTG CCGCTTTGCT GA
 
Protein sequence
MNKKVDVIVI GAGSAGLAAV RQIEKTTDNY LLIDQGPLGT TCARVGCMPS KAFIKVARDF 
HGATRLAQAG LTGTAPADCD IPAVLEHVRR LRNRFASGMV EVTRKLAGDR LIKGAARLLG
PNRVLVNDEE ITCSSIILAT GSRPTIPEAW RGFSDRILTA DTFFEQQDLP RRIAVVGLGI
IGLELGQALA RLGIEVTGFG RNPHICGIRD PEINRVALET LGRQFPLHVG DEAEMTPAGK
TLRIRNGFHE VEVDAVIAAL GVTPNMDNLG LENLGVPLDA RGLPPYHPYT TQIGDLPVYV
AGDANGCLPI LHEAQDEGFI AGRNATGTQI QKYRRRAGLK IVFTDPQVAA VGQTLNKLED
ADIIVARADF SEQSRAIAEG RNAGLMHLYV NKADARILGG EMIVPDAEHL AQLLALAIHR
EMTVHDMLTM PFYHPTVEEG LRTALRDAAR QLHHMHSKEE LTLCESCPEL PLC