Gene Pcar_1473 details

Gene Information

• Locus tag: Pcar_1473
• ID: 3723806
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 1719718
• End bp: 1720257
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637751066
• Product: transposase, putative
• Protein accession: YP_356889
• Protein GI: 77919074
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1943] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 80
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCAAACT ATCGGCGTAC TTATGTTGCT GGAGGACGCT ATTTCTTTAC CGTCAATTGT 
GCAGAGCGTC GCAACAATCG AATACTTGTG AACCGGATCG ATTTGTTACG GAAGGTTTTT 
CGCAAGGTGA AGGCCGATCA TCCGTTCCAT ATTGATGCCA TCGTTGTTTT GCCGGAGCAC 
CTGCATTGTA TCTGGACTCT CCCGCCGGGG GATTCCGATT ACAAAACTCG GTGGAGTCTG 
ATCAAGGCCG GTTTTTCGCG CCAAATAGGC GCTGGGGAAT ACCTGTCGGA GAGCCGAGGG 
AAGAGAGGTG AACGGGGTAT TTGGCAGCGT CGCTATTGGG AACATTTTAT TCGAGATGAT 
CCGGATTATC GGCGACATGT TGATTATATC CATTGGAATC CGGTGAAGCA TGGTTGGGTA 
ACGCGGGTGA TAGACTGGCC TTATTCAAGC TTTCATGATG GCGTCAAGCG AGGACTTTTC 
CCACCGGATT GGGCAGCGGA GCCTGAAGGA ATGTTGGATG TTGGCGAGGC AGGGGATTGA 

 

Protein sequence

MANYRRTYVA GGRYFFTVNC AERRNNRILV NRIDLLRKVF RKVKADHPFH IDAIVVLPEH 
LHCIWTLPPG DSDYKTRWSL IKAGFSRQIG AGEYLSESRG KRGERGIWQR RYWEHFIRDD 
PDYRRHVDYI HWNPVKHGWV TRVIDWPYSS FHDGVKRGLF PPDWAAEPEG MLDVGEAGD