Gene Pcar_1449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1449 
SymbolnusB 
ID3723821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand+ 
Start bp1694090 
End bp1694560 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content54% 
IMG OID637751042 
Producttranscription antitermination factor NusB 
Protein accessionYP_356865 
Protein GI77919050 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value0.393092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGCG GCATGCGCCG TACAGGGCGC GAACTGGCAA TCAAAATAAT TTATAGCTTC 
GATGGCACCG GCAGCGTTGA GGCGCTGTTG GCAACCTTCT GGAGCAACTT CAGATTTCGG 
GATGATGTGT TGGGTGAACC GCTCGAAGAC AGCAGCCAAG CGGTTGCCGA ACCGGTGCGC 
GAGTTTGCCG AGGATCTGGT TCGTGGGGTA GCCGAGAATC TCGAGAAAAT CGATGGGTTG 
ATTGGCGAAT TCTCCACCAA TTGGTCCTTG GAGCGTATGG CACGGGTCGA TCTTGCTATT 
CTGCGTATGG CAACCTATGA GCTTCTAGGC CATCTGGACG TGCCCGTAAG CGTTATCATC 
AACGAGGCTG TCGAGATCGG TAAGCGTTAC GGAACCAAAG AAACGCCATC CTTTGTCAAT 
GGCATCCTCG ATCGTATCTC ACGCACCTGC AGGCCTGTCG TCGCGTCATG A
 
Protein sequence
MASGMRRTGR ELAIKIIYSF DGTGSVEALL ATFWSNFRFR DDVLGEPLED SSQAVAEPVR 
EFAEDLVRGV AENLEKIDGL IGEFSTNWSL ERMARVDLAI LRMATYELLG HLDVPVSVII 
NEAVEIGKRY GTKETPSFVN GILDRISRTC RPVVAS