| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1430 |
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| Symbol | rpoS |
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| ID | 3723857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 1677244 |
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| End bp | 1678287 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637751022 |
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| Product | DNA-directed RNA polymerase, sigma 70/sigma 32 subunit |
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| Protein accession | YP_356846 |
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| Protein GI | 77919031 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00000000837712 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGAAGG TTCGCAAACG CCGTCAGGCT GCCGTGGATG CAGGTGCAGT CGAGGAAGAG
GTTGAGGTCG TAGGGGGAGC AAAAGAAGGA GGGCTCGGCG CTATGGGAGT TCTGGACAAT
GTGGATGAGG TGGAAGAACG TGAAGAGTCC GAAGTAGAGG AATCCGAAAA AAGCAAGAAG
GACGAAGGGC CCTCCGACGA CGCTATAAAG CTTTATCTCA AAGAAATTCA AAAAACGAAA
TTGCTCACTG CCGAAGATGA GCGTATGCTT GCTCGGCGCA TTTCGCAGGG AGATATGGCT
GCCCGTGACA GGATGATCGA ATCGAACCTG CGGCTGGTAG TTAAAATAGC CAAGCGTTAT
ATGAATCGTG GTTTGCCGTT TCTCGACTTG ATCGAGGAGG GTAACATGGG GCTTATCAAA
GCGGTCGAAC GCTTCAAGCT CAGCAAGGAA TGCCGGTTTT CCACTTATGC AACCTGGTGG
ATCCGTCAAT CCATAGAGCG CGCCCTCGTG AATCAGAGCC GGACGATTCG TTTGCCGGTT
CATGTGTCTG ACGATATCAA TAAGTTCATC AAAATCAGTC GAGAGCTTGT TCATCAGTAC
AACAGGGAAC CAAAGGTTGA AGAAATCGCC GAATACATGG GTGTCGAACC GGCCTATATC
CGGCGGCTCA TGGTGTTGGT CAAAAAGACC TATTCCATAG AACATCCCAT GGGCGAGAAT
CGCGATTACA GCCTTATCGA TACCATTGAG GATCCCAAGG CCGACAATCC CAGTACTTTT
GTGGATGATA TCGACAAATA TGCGCACGTC TGCAACTGGT TTGAGACCTT GAGTGAGAAT
GAACGGGAAA TTCTCATGCT TCGTTTTGGT CTTGACGACC AGGAACCCCA GACGCTCGAT
ACGATCGGAC GACGTTTCGG CGTGACCCGC GAACGTATCC GGCAGATCGA GGCAAAGAGT
CTTCAAAAAC TGAGAAACCT TATGGAAGAG CAGGAGAGTG CCAGTCTCGC TTTTATGGAG
AGTGAGATGG GGAAGCGCTC CTGA
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| Protein sequence | MGKVRKRRQA AVDAGAVEEE VEVVGGAKEG GLGAMGVLDN VDEVEEREES EVEESEKSKK
DEGPSDDAIK LYLKEIQKTK LLTAEDERML ARRISQGDMA ARDRMIESNL RLVVKIAKRY
MNRGLPFLDL IEEGNMGLIK AVERFKLSKE CRFSTYATWW IRQSIERALV NQSRTIRLPV
HVSDDINKFI KISRELVHQY NREPKVEEIA EYMGVEPAYI RRLMVLVKKT YSIEHPMGEN
RDYSLIDTIE DPKADNPSTF VDDIDKYAHV CNWFETLSEN EREILMLRFG LDDQEPQTLD
TIGRRFGVTR ERIRQIEAKS LQKLRNLMEE QESASLAFME SEMGKRS
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