Gene Pcar_1300 details

Gene Information

• Locus tag: Pcar_1300
• ID: 3723602
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 1521560
• End bp: 1522162
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637750889
• Product: hypothetical protein
• Protein accession: YP_356719
• Protein GI: 77918904
• COG category: [K] Transcription
• COG ID: [COG1386] Predicted transcriptional regulator containing the HTH domain
• TIGRFAM ID: [TIGR00281] segregation and condensation protein B

Plasmid Coverage information

• Num covering plasmid clones: 77
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGACTTT TGGATACTGT TGAGCTTAAA GCCATTATTG AAGCGCTGCT TTTCGCTGCT 
CCGGGGCCCG TTCGCCTTGA GCAGTTGGCA TTGGCCGCCG ATGCCGACCC TGCACGGGTG 
GCACCTCTGC TGGCAGAGCT CGAAACCGAA TATCTTCGGG CCGGCCGGGG TTTCGTGCTG 
GTCGAATTGG CAGAAGGGTA TCAACTGCGC ACGCGGCCGG AGCATGCAGA GTGGGTGCGA 
CGTCTTCATA GCAGCCGCCC GACGCGTCTT TCCCGCGCAG CACTGGAGGC CCTTGCCATT 
ATTGCCTACC AGCAACCGGT GACGCGGGCC GACATCGATT ATCTGCGCGG TGTCGATTCC 
GGTGGGGTTG TCAAGAGCCT GCTGGATAAA CGGCTGGTGC GGATCGTGGG AAAAAAAGAT 
GTCCCGGGTC GCCCCTTGTT GTACGGTACC AGCAGGGAGT TTCTGGAGTT TTTCGGTCTG 
CGCTCCCTGA GCGACCTTCC AACGCTCAAA GAGTTTACGG AGCTGACCAA GGAAAGCGAA 
AGTTTACTGT TCGATTTTGA CGCCGGCGCC GGCGGGGCAA CGGCATCGTC CGAACAAGCC 
TGA 

 

Protein sequence

MRLLDTVELK AIIEALLFAA PGPVRLEQLA LAADADPARV APLLAELETE YLRAGRGFVL 
VELAEGYQLR TRPEHAEWVR RLHSSRPTRL SRAALEALAI IAYQQPVTRA DIDYLRGVDS 
GGVVKSLLDK RLVRIVGKKD VPGRPLLYGT SREFLEFFGL RSLSDLPTLK EFTELTKESE 
SLLFDFDAGA GGATASSEQA