Gene Pcar_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1202 
Symbol 
ID3723699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1410409 
End bp1411287 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content50% 
IMG OID637750791 
Productsignal transduction protein 
Protein accessionYP_356621 
Protein GI77918806 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.203689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCGA AAATAAGCTC CGAAGAAGTC CGGCAGGCCA TTGATAACCT GCCGATGCTG 
TCACCGAATG TCAGTCGGTT GCTGCAGGTC ATGGCCAATG AAGATTATGA GCTTGACGAT
GTGGTCAATA TCGTTAAATA TGATGCATCT TTGACAGCCA AAGTTCTCAA GATGGTCAAT
TCGCCTGTTT TCGGATTGCT TAATCCGGTC ACGTCGCTTG ACCGGGCTAT CAGCTATCTT
GGAAAATGGA TTGTCGTCAG TATCATTTTA TCCGATAATA CCGGTGATCT TTTCAGTCAG
CCCCTTGAAG GCTATGAGGG GCAGCAGGAT GCTCTGTGGC GACACGATCT GTTCGCGGCA
TTTTCCAGCG GTGAAGTGGC GCGATTGGCC AAACAGGATT TCGAAGCCGA GCTGGCCTTT
ACCGCAGGGC TTTTGCACGA TATCGGAAAA TTTGTTTTTT CGCCCTTCTG GAAACAATTG
GCGCCGGAAG CCCTTGGATA TATCAAGGAG GGTAATGTTA GCGATTATCT GCAAGCCGAG
AGAACCCTGG CGGGTTTGGA TCATGCGCAG GTGGGATACG AAATGGCCAG GCATTGGGAT
TTTCCCGAGC CGTTGCAGCA GGCCATTCTT TATCACCATA CGCCCATGCA GGCGCCGGAG
GAATATAGAG CGCTGGCTTT CGCCGCTCAC CTGGGCGATA TGTGCGCCAT GATGGCCGGC
TGCGATACCG GCAATGACGG CATGCAGTAT CAACTGGATG CCGGATATGC CGAGTACTTT
GATGTCAATT CAAAAACTCT GGCTCAGATT CTCATGGAAG CGGAAGCCCA ATTTCAAAAA
GCGGTTTCGT CTCTTTCCTT TGAAGAGGAG GTTGATTAG
 
Protein sequence
MEPKISSEEV RQAIDNLPML SPNVSRLLQV MANEDYELDD VVNIVKYDAS LTAKVLKMVN 
SPVFGLLNPV TSLDRAISYL GKWIVVSIIL SDNTGDLFSQ PLEGYEGQQD ALWRHDLFAA
FSSGEVARLA KQDFEAELAF TAGLLHDIGK FVFSPFWKQL APEALGYIKE GNVSDYLQAE
RTLAGLDHAQ VGYEMARHWD FPEPLQQAIL YHHTPMQAPE EYRALAFAAH LGDMCAMMAG
CDTGNDGMQY QLDAGYAEYF DVNSKTLAQI LMEAEAQFQK AVSSLSFEEE VD