Gene Pcar_1157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1157 
Symbol 
ID3723732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1353928 
End bp1354665 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content54% 
IMG OID637750747 
Productflagellar basal body rod protein 
Protein accessionYP_356576 
Protein GI77918761 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones75 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGAG GAACCTACGT CGCCCTGTCG GGAGCCCTGG TACGCCAGCA ATTGATGGAT 
ACCATAAGCC ATAACCTGTC CAACAATGAA ACGGTGGGTT TTAAAAAAGG TCAGTCGGTA
TTCAAAACCA TGCTGGAAAG AGTGCAGACC GGCGAAATTC TGGAGCGCGT CAACCTGGCC
GAAATCGAGG AAGGCTTTAC CGATTTTTCC CAGGGGACGC TGTCACCGTC CGGCATCCAG
ACCCATATGG CTATACAAGG CGAAGGCTTT TTCAAGGTCG AGGATGAAGC CGGCAACATC
TACTATACCC GGCAAGGCAA CCTGCGGCTG GATTACGAGG GACACCTGAT CAATAACCAG
GGCATGGCCC TGCTCGGCGA AGACAGGCGT CCCATCACCT TGACGAGTCC CGATTTCACC
GTCGACGACG ATGGCACCAT CACGCTGGAA GACGGCCAGA AGATCAAGAT CCCCCTGTAC
ACCTTCGATG ATTACTCTGT ACTCACCCGC CAGGGCGGAG GCCAGTTCAG TGTGCCGAAG
GGTCAGGAGC GGGACCTGGA AATCCTGGTT AAGGATTCAC ATATTTACCA GGGCCAACTG
GAACGCTCCA ACGTCAATCT GATGCAGGAA ATGAGTCACA TGGTCGAATC GACACGGGTT
TTCGAAGCCT GCCAGAAAAT GCTCAAGACA TACCATTCGA TAGCGGCGGA GGCCAACAAA
CTCGGCACGC TGGGATAG
 
Protein sequence
MNRGTYVALS GALVRQQLMD TISHNLSNNE TVGFKKGQSV FKTMLERVQT GEILERVNLA 
EIEEGFTDFS QGTLSPSGIQ THMAIQGEGF FKVEDEAGNI YYTRQGNLRL DYEGHLINNQ
GMALLGEDRR PITLTSPDFT VDDDGTITLE DGQKIKIPLY TFDDYSVLTR QGGGQFSVPK
GQERDLEILV KDSHIYQGQL ERSNVNLMQE MSHMVESTRV FEACQKMLKT YHSIAAEANK
LGTLG