Gene Pcar_1140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1140 
Symbol 
ID3723754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1337514 
End bp1338377 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content57% 
IMG OID637750730 
Productpolysaccharide biosynthesis protein, putative sialic acid synthase 
Protein accessionYP_356559 
Protein GI77918744 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2089] Sialic acid synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones94 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGAC CGCTATTTAT TTCCGAGGTT TCGAGCAATC ATCACCGTGA TTTGCAGAGA 
TGCTTTAACT TTATCGATCG TTCGGCCGAT ATAGGATGCT GGGGGGTAAA GTTTCAACTC
TTTCACATTG ACGAGCTATT CGCACCGGAG ATCCTTGCCA AAAGCGAACT CCATCGCCGG
CGACGGGACT GGGAATTACC GGAAGAGTAT ATCCCTCAAC TGGCCCGACA CTGCCGGCAG
CGCGGCATCG CCTTCGGTTG CACGCCGTTT CACTTGCAAG CGGTTGACGT ACTGGCGCCG
CATGTCGATT TTTTCAAAAT CGCATCTTAC GAACTGCTGT GGACGGAACT GCTACAGAGC
TGTGCCGCCA CGGGCAAACC GGTGATTCTT TCGACCGGCA TGGCCACCAT GGATGAAATT
ACCGGTGCGG TAAAAACCCT GCGTGATGCA GGCTGCAGCG ATCTTACATT ACTGCACTGC
GTATCGAGCT ATCCCTCCCC TGCCGCCGAA TGCAACCTGG CGGCCCTGGA CACTCTGCGC
AGGGCATTCG ACTGCAAGGT CGGCTGGTCG GACCACAGCG TATCGCCGGC AGTGATCAAC
CGGGCCGTAA ATCGCTGGCA GGCTTCCATG ATCGAGTTTC ATCTCGACCT GGACGGTCAA
GGGGAGGAAT TTGCCGCCGG CCACTGCTGG CTACCCGAAC CGATGGAAAA GGTCATCCGG
GACATGGAAC AGGGCCTGTG CGCCGATGGC GACGGGGACA AAAAACCGGT TGCCAGCGAA
TTGCCGGACC GCGAATGGCG GGCGGATCCC TCGGATGGGC TGCGGCCTTT CAAACACATG
CGCAAAGGAT TTGGCAATGA CTGA
 
Protein sequence
MTRPLFISEV SSNHHRDLQR CFNFIDRSAD IGCWGVKFQL FHIDELFAPE ILAKSELHRR 
RRDWELPEEY IPQLARHCRQ RGIAFGCTPF HLQAVDVLAP HVDFFKIASY ELLWTELLQS
CAATGKPVIL STGMATMDEI TGAVKTLRDA GCSDLTLLHC VSSYPSPAAE CNLAALDTLR
RAFDCKVGWS DHSVSPAVIN RAVNRWQASM IEFHLDLDGQ GEEFAAGHCW LPEPMEKVIR
DMEQGLCADG DGDKKPVASE LPDREWRADP SDGLRPFKHM RKGFGND