Gene Pcar_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1118 
Symbol 
ID3722830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand- 
Start bp1314149 
End bp1314826 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content63% 
IMG OID637750708 
Producthypothetical protein 
Protein accessionYP_356537 
Protein GI77918722 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones80 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTGT TGATGATTGC CGCCCATCCC GACGACGAGG TTCTCGGCGC CGGCGGGGCC 
ATCGCCCGCC ATGTGGAAGA CGGTGACAGC GTCAGCATCC TGATCCTCGG CAGCGGTCTG 
TCTTCGCGTC TCGACGCCCC CGGACAACTG GACCCGCAGG CATTATCCGC CCTGCGCACC 
GAAGCTTCAC GGGCCGCCGC AATTCTCGGC GTTACCGACC TGCGTTTGCG CGATTTTCCC 
GACAATCGCT TTGACCGCGT GGACCTCCTC GATATCGTCA AAGCCATCGA AACCGTCGCC 
GAAGAAATCA TGCCGGAAGT GGTCTATACC CATCATCCCG ACGATCTCAA CGTCGACCAC 
CGGCGCACGG CCATGGCCAC CCTTACCGCA TTCCGTCCGC TACCGGGCAG TACCGTACGG 
CGTATTTTGG CCATGGAAGT CCCCTCGGCC ACCGGCTGGG GAGACCCTTC CCGGCCTTTT 
GCCCCGACCG TCTTTCTGGA CATCGCCGCG GTACTGGACA AAAAGCTGGC CGCCATGGAG 
GCCTACGCAG GCGAACTTCG CCCCTTCCCC CATGCCCGCT CGCTGCCCTC TATGGAGGCC 
CGGGCAAAAG CCCATGGCAG CCAGGTCGGT CTCGAAGCCG CCGAACCCTT CGTTTTACTG 
CGTGAGATCC TGCCATGA
 
Protein sequence
MKVLMIAAHP DDEVLGAGGA IARHVEDGDS VSILILGSGL SSRLDAPGQL DPQALSALRT 
EASRAAAILG VTDLRLRDFP DNRFDRVDLL DIVKAIETVA EEIMPEVVYT HHPDDLNVDH 
RRTAMATLTA FRPLPGSTVR RILAMEVPSA TGWGDPSRPF APTVFLDIAA VLDKKLAAME 
AYAGELRPFP HARSLPSMEA RAKAHGSQVG LEAAEPFVLL REILP