Gene Pcar_1109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1109 
Symbol 
ID3722821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1305409 
End bp1306164 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content54% 
IMG OID637750699 
Producthypothetical protein 
Protein accessionYP_356528 
Protein GI77918713 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5581] Predicted glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones69 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACCTC CGACCTGTTG CGCCACCGAT ATCCCGGCAA AAAAACAGCA CACCGATTTT 
GCCGGCAAGG TCATTTGGAA CGAAATGCTG AATACGCTGC TGGACCATTT CAGAAATGGC
CGGAATGCCA AAATACTGTT ACCTACCCAT GGACAACGTA CCATTGCCGT AGATGGTTCC
GTGCGCACGC ATTCAGACCA CGCCCTGGAC ATAGCCCTGC CCTACGATCG CGATTTCAGT
ACCCTCATCA ATCCTCGGGA AATATGCCAG ATCTTTTTTT CTCTGCAGGG CCGGGAATAC
CGTCTGCTCA CCCGCATACA GACCATTCTT GGAACCTCGA ACCTGCTGGT CAAACCCAAG
CCGCCGGCCA TTGCCCTTCA GGAGCGTGAA TTTTTCCGTA TCGATGCCAG GATCAGATTC
GCCTATTACT GTCTCGGCGA CGATCAACCC CGCACGCCTT ATCCCCTGAA TACCAAGGTT
AATCTCAGTG CCAGCGGGCT TCGACTGCCC GCGCAGAAAA ACCTCGATAT CGGCGATCTG
GTCGCTATGG TATTGTGGCT GGACGGGAAG ACGCCTGAAT GCATTGAGTG CCTGGCCCAG
GTGGTTCGCT TTTGCACATT ACCCAACGGC GACATGGCCG TGGCTGTACA ATTCGCAGAA
ATCGACAATC AGGACCGCGA CAAAATCGTC GCGTTCTGTC TGGCCAAGGA ACGCGAGATC
CTGCGCACCA AGGTACGAAC CCGGGATCTC TTCTGA
 
Protein sequence
MAPPTCCATD IPAKKQHTDF AGKVIWNEML NTLLDHFRNG RNAKILLPTH GQRTIAVDGS 
VRTHSDHALD IALPYDRDFS TLINPREICQ IFFSLQGREY RLLTRIQTIL GTSNLLVKPK
PPAIALQERE FFRIDARIRF AYYCLGDDQP RTPYPLNTKV NLSASGLRLP AQKNLDIGDL
VAMVLWLDGK TPECIECLAQ VVRFCTLPNG DMAVAVQFAE IDNQDRDKIV AFCLAKEREI
LRTKVRTRDL F