Gene Pcar_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1079 
Symbol 
ID3723903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand- 
Start bp1269248 
End bp1269982 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content53% 
IMG OID637750670 
Productcarboxymuconolactone decarboxylase family protein 
Protein accessionYP_356499 
Protein GI77918684 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones71 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA AGCGGACCGC GTTTCTAACC ATTCTGATGA CCTTGATGTT TAGCTTTCCA 
GCCATTGCGG AGGCAAAAAA CATGGAAAAA GTTCAGACTC TGAATGCAAG ACAGCAAGCC 
ATCGTCCCCA TCGCCGCCTT TACCGCTAAC GGCGACCTGG ACAAGTTAAA ACCAGCCCTG 
GTCGATGGAC TTGATGCCGG TTTGACGGTC AATGAAATCA AGGAAATCCT GGTGCAGATG 
TATGCTTATG CGGGCTTCCC ACGCAGCCTC AACGGCATTC ACGCCTTCAT GGCCGTCCTG 
GATGAACGGC AGACCAAAGG TATCGATGAT GAGATGGGCA AAGAAGCCGG TCCCACGCCT 
GCCGACCTGG ACAAGGATAA ATACGGGGCT GAAGTGAGGG CAAAGCTAGC GGGCCTGGAA 
ACGGATATCT CTTCTGCAAA ATGGCAACAA TTCGCCCCCG CCATCGACAC TTTCCTCAAG 
GAACATCTGT TTGCCGACAT CTTTGTCCGC GCCATCCTCA ACCATCAGGA AAGGGAGCTG 
GCCACAATCG GCGCTCTGGC CGCCATGCCG GGTACGGAGG GGCAGCTGCA TTTCCATTTC 
GGTGCCGCGA TGAATACCGG ATTCAGCGAA GCCCAAATGA AGGATTTTAT CTCCGTGCTT 
GATGTAAAGG TCGGGAAAAA AGAAGCCGAA AGTGCTCGTA AGGTTCTGAA CGCAGTGCTG 
GTCAGCAGGA AATAG
 
Protein sequence
MNKKRTAFLT ILMTLMFSFP AIAEAKNMEK VQTLNARQQA IVPIAAFTAN GDLDKLKPAL 
VDGLDAGLTV NEIKEILVQM YAYAGFPRSL NGIHAFMAVL DERQTKGIDD EMGKEAGPTP 
ADLDKDKYGA EVRAKLAGLE TDISSAKWQQ FAPAIDTFLK EHLFADIFVR AILNHQEREL 
ATIGALAAMP GTEGQLHFHF GAAMNTGFSE AQMKDFISVL DVKVGKKEAE SARKVLNAVL 
VSRK