| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1076 |
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| Symbol | |
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| ID | 3723900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 1264144 |
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| End bp | 1265355 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637750667 |
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| Product | pheromone shutdown protein PrgY-lke protein |
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| Protein accession | YP_356496 |
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| Protein GI | 77918681 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 0.535689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTCCA GCCAGACTCT CCAGCAGCCA TCGGCAAAAG AAGAAACCGC CGCTTCCGAT
ATCTTGCGTA TCCAGCTTCA CGACAAACAG GTGGTTCTCA TCGGCACCGC CCATATTTCA
CGGGATTCCG TCGACACGGT CCGTCGCATC ATCGAAACGG AACAGCCGGA CGCCGTCTGT
GTCGAGCTCG ACCAGCAACG TTACGAAGCG ATTCGCGACC CCCACCGCTG GCGCTCTTTG
AACCTCATCC AGGTACTGCG TCGTGGACAG GGGGCCTTTT TGTTGGCCAA CCTGGCGCTG
TCGTCGTTCC AGAAGCGCAT GGGCATGGGA ACCGGTGTGA AGCCGGGCGA AGAACTGGCT
GCAGCAGCCG AGGAAGCCGA GCAGCGTGAT CTGCATCTGA GCCTCATTGA CCGCAACATC
CGCACCACCT TGCTGCGCGC CTGGCGTCGC ACCGGTCTCT GGAAAAAACT CCAACTGTTT
TCGGCTCTGG TGGCGGGCAT GTTTGACAAC AGCAGTATGG ATGAAGAACA ACTCGCGGAG
CTGCGCCAGC AGGATACGCT TTCCGCTCTG TTGGAGGAGA TGGGGGATAA TCTTCCGGAA
TTAAAAACGG TCCTGGTGGA CGAACGGGAT CGTTACATGG CCTACCATAT TGCCCAGACC
CCCGGGCACA AGATCGTTGC GGTGGTCGGA GCGGCGCATG TCCCGGGCAT TCGGAAAAAC
CTGCCTTGCT CCATGACCGA AAAAGATATT CAGGACATCA GCCGGATTCC TGAAAAATCC
CTTTTATCCA AATCGATTCC CTGGCTGATA CCTTCCATGG TCGTGGCGCT GTTTGTCGCG
GGATTCTTTC TCGGAGATCG GGCGCGTCTG GCCGATGCGG CAACAGCCTG GTTCCTGGCC
AACGGCGTAC TGTCCGCCCT GGGGGCCATC ATCGCCCTGG GGCACCCTTT GACCGTGATC
ACCGCCTTTA TCGCCGCGCC CTTCACTTCT CTTAATCCGA CCATCGGTGC CGGCTTTGTC
ACCGGCCTTG TTCAGGCATG CCTGGCCGCC CCTACCGTAC AGGACCTGGA AACCGTCGGC
GACGACCTGG CCACCCTGCG CGGCTGGTGG GGAAACCGCC TTACCCGGGT TCTGCTGGTC
TTCTTGTTTT CCAATCTGGG CTCGACTGCC GGTACCTTTA TGGCCTTCCA CTGGCTCAAG
GATCTTATCT GA
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| Protein sequence | MSSSQTLQQP SAKEETAASD ILRIQLHDKQ VVLIGTAHIS RDSVDTVRRI IETEQPDAVC
VELDQQRYEA IRDPHRWRSL NLIQVLRRGQ GAFLLANLAL SSFQKRMGMG TGVKPGEELA
AAAEEAEQRD LHLSLIDRNI RTTLLRAWRR TGLWKKLQLF SALVAGMFDN SSMDEEQLAE
LRQQDTLSAL LEEMGDNLPE LKTVLVDERD RYMAYHIAQT PGHKIVAVVG AAHVPGIRKN
LPCSMTEKDI QDISRIPEKS LLSKSIPWLI PSMVVALFVA GFFLGDRARL ADAATAWFLA
NGVLSALGAI IALGHPLTVI TAFIAAPFTS LNPTIGAGFV TGLVQACLAA PTVQDLETVG
DDLATLRGWW GNRLTRVLLV FLFSNLGSTA GTFMAFHWLK DLI
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