Gene Pcar_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1062 
Symbol 
ID3723925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp1249798 
End bp1250145 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content55% 
IMG OID637750653 
ProductHIT family hydrolase 
Protein accessionYP_356482 
Protein GI77918667 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.000102876 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGACA ACTGTCTTTT TTGTAAAATC ATTGCCGGCG AAATACCGGG CACGTTTATC 
TACGAGGACG AAAAGGTCGT GGTGTTGCAG GATATCGCAC CGCAAGCGCC GCATCATTAT
CTGATCATCC CGCGTAAGCA TATCCCCACC ACCCTCGATC TGGCCGTTGA GGACAACGCG
CTTGTCGGAC ATGTTTATCA GGTCGCCTCA CGACTGGCCG AACGACACGG TTTCGAGAAG
GACGGCTTCC GGGTTGTCAA CAACTGCAAC GAAGGCGCCG GTCAGACCGT CTGGCACCTG
CATTTTCATC TGCTTGGCGG CCGCACCATG AACTGGCCTC CGGGGTAA
 
Protein sequence
MTDNCLFCKI IAGEIPGTFI YEDEKVVVLQ DIAPQAPHHY LIIPRKHIPT TLDLAVEDNA 
LVGHVYQVAS RLAERHGFEK DGFRVVNNCN EGAGQTVWHL HFHLLGGRTM NWPPG