Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1011 |
Symbol | |
ID | 3723952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 1184634 |
End bp | 1186847 |
Gene Length | 2214 bp |
Protein Length | 737 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637750603 |
Product | two component signal transduction sensor |
Protein accession | YP_356432 |
Protein GI | 77918617 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.880836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTTC TAAAAAATAT ACAAAGTTCT ACGGGACTTG CCCCCCGCAT TGCCTTTTTA TCATGGCTGT TGGCATTGAT CACCTTGCTG ACCTTCGTTC TATTGACCAT TCCTCAGCAA AAGGAGATTT TGATCCGCAA CCTGGAATCC AAAGCCAACG GCGTCGCGGT ATCGTTGCAC GATGTGGCCG CCGGAGCGGC GATAAACGAT GACCTCGCAA GCGTGGTCAC TGCCTGTCAG ACCCTCCTCG CCGGTGACCC GGATCTCGAA TTTTTGATCA TCACTAAAAA TGACGGATTT TCCCTGGTCA ATCAGCAAAC CGGCTGGCGG GTTGAGCCGC AAATCGACAG CTACTGGGTA TCCGACAAAC GCATACCGCA GGGGAAAATA ACTACCGTTC CACTATTGAA TCAGAGGGTA TTTCACTTTG CCAAACCCTT TGACTATTCC GGCATCGAGT GGGGTTGGAT TCATGTCGGC CTGTCCCTTA AGGATCACGA TCACAGCGTT GCCACCCTGT ATCGTAATAC CATCGGGTTA ATATTGGCCT GCCTTCTACT AAGTCTGCAT CTCGCCCTTT TTTACGCCCG AAAAATCGTA CGACCGATCC TACGTCTTAA AAAGCTGGTC CAAAAGATTG CCGACGGCGA TCTTACCGTT CGGGCGGATG TCAACAGGCG GGACGAACTC GGCGATCTCG CCCAATCGGT CAACACCATG ACCGATTCTC TACTACGCCG GGACCGTATC CTCGAAAGTG TCCGGTTTGC AGCCCAACTC CTGTTGCGGA CTGAACAATG GGGGGACAGT ATCCACGAAG TTCTCGCCAA ACTCGGCCAG GCAGCGAAAG CTTCCCGGGC CTATTTATAC GAGAACATTC AAAACGATAC AGGACAAATC TGTTCCTCCA GGCGCTATGT GTGGGAAACC TCATCGGCCG CTTTGCAAAC GGCCCATTCC CCCCTGGAGC TGGTTTCATA TGACCATCCG GATCTTGAAA AGTATCGGAA AAAACTTGCA AACAACCGCA TACTGAGCGG CGTGGTTTCC GACAAAAGCT CCGGTTTGCG TGCCTTGCTC GAACCCTTGG GCATTCGCTC TGTCATTGTC ATACCGGTCT TTGTCAACAA CATCTGGTGG GGCTTTTTGG GATTAGACGA CTGCGATCGC TGTCGTGAAT GGACCGAAGC CGAAAAAGAC AGTCTGCGAG CCGCTGCAGA AATGTTGGGG GCCACCATAG CCCGACAAGG CATCCGAGAT GCCCTGCTCG AAGCCAAGGC CACCTTGGAA GACCGCGTTA AGGAACGCAC TCTGGAACTC CAGACTCAGG TCGCGGCCAA GGAGAAAGCC CTGTCGGAAC TGGCCGAGGC CCAGAGTACT TTGGTCGAAG TTTCCCGCGC CGCCGGCATG ACCGAGGTAG CGACCGGTGT GCTGCACAAT GTCGGCAATG TCCTGAACAG CGTAAATGTC TCCAGCACTT TAATCATCGA TCTGATTAAA AAATCACGGG TTGGAAATAT CGCCAAAGTA GCGGAACTCA TTCAGGATCA TACCGATTGT TTGCCGGAAT TTTTAAGCCA GGATGCACGC GGCAGTCAGA TCCCCGTTTA TCTGTCTTCC CTTGCCCTAT CTCTGCAAGA CGAACAAACA TCTTTGCTTA AAGAAACCGA ATCCCTGAGA CAAAGGATCG ACCACATCAA AGAAATCATC TCCATGCAAC AGAGTTACGG TCGCGTCGGC GGGGTTGATG AAACCGTCTA TCCCGACCAG CTCATGGAAG ATGCGCTTAA ACTCAATGCC AACGCCCTTG AACGGCATGG CATATCGGTA CAACGACAAT ACCGTCATGA TTTCCCGATT GTTACGGACA AACACCGGGT ACTGCAGATA CTTCTGAACC TGATTAACAA TGCAAAACAT GCCTGCTGCG AAATCGTGGG TGAGAAGAAT ATTACCTTGC AGATCGAAGC TCCCGATCCG GAACACATTC TCTTCCAGGT CACCGATACC GGCATCGGGA TTCCCCAGGA AAACCTGACC CGTATATTTC AGCACGGTTT TACTACCCGC AAAACCGGCC ATGGTTACGG CCTGCATAGC GGAGCCCTTA CCGCCAGAGA GCTCGGCGGC AGCCTCGCCG TACACAGCGA TGGGCCAAAC ACGGGTGCTA CATTCACCCT CATACTGCCC ATTCACCCAA AAGAGAGAGC ATAA
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Protein sequence | MSFLKNIQSS TGLAPRIAFL SWLLALITLL TFVLLTIPQQ KEILIRNLES KANGVAVSLH DVAAGAAIND DLASVVTACQ TLLAGDPDLE FLIITKNDGF SLVNQQTGWR VEPQIDSYWV SDKRIPQGKI TTVPLLNQRV FHFAKPFDYS GIEWGWIHVG LSLKDHDHSV ATLYRNTIGL ILACLLLSLH LALFYARKIV RPILRLKKLV QKIADGDLTV RADVNRRDEL GDLAQSVNTM TDSLLRRDRI LESVRFAAQL LLRTEQWGDS IHEVLAKLGQ AAKASRAYLY ENIQNDTGQI CSSRRYVWET SSAALQTAHS PLELVSYDHP DLEKYRKKLA NNRILSGVVS DKSSGLRALL EPLGIRSVIV IPVFVNNIWW GFLGLDDCDR CREWTEAEKD SLRAAAEMLG ATIARQGIRD ALLEAKATLE DRVKERTLEL QTQVAAKEKA LSELAEAQST LVEVSRAAGM TEVATGVLHN VGNVLNSVNV SSTLIIDLIK KSRVGNIAKV AELIQDHTDC LPEFLSQDAR GSQIPVYLSS LALSLQDEQT SLLKETESLR QRIDHIKEII SMQQSYGRVG GVDETVYPDQ LMEDALKLNA NALERHGISV QRQYRHDFPI VTDKHRVLQI LLNLINNAKH ACCEIVGEKN ITLQIEAPDP EHILFQVTDT GIGIPQENLT RIFQHGFTTR KTGHGYGLHS GALTARELGG SLAVHSDGPN TGATFTLILP IHPKERA
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