Gene Pcar_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1000 
Symbol 
ID3723978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand+ 
Start bp1173325 
End bp1173981 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content54% 
IMG OID637750592 
Producthypothetical protein 
Protein accessionYP_356421 
Protein GI77918606 
COG category[S] Function unknown 
COG ID[COG4856] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.000422798 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAC TGTTGACGGA AAACTGGGCG CTGAAGCTTC TTTCGCTGGT TTTTGCTCTA 
ATCCTGTGGT TTTTCGTCAT GGGGGAGCGT AAGCTCGAGC GTTCCTATGC CGTGCCTCTG 
GAAATGAAAA ATATGCCGGA AGGCATGATG GTGGCCAACG ATGTGCCGAG TGTCGTTGAG 
GTTCGTATCA GCGGTCCGCG CACGCTGCTG GTGAATCTGC ACTCTGAGGA TATGCGCATC 
CTTGTCGACT TGAAAGGGCT TGATGTCGGA TTGACGTCTT TCAAACGTCT CGAGGAGCGT 
CTCAATATCC CGGCGCCCCT GAAGGTGACC CGGCTGTCGC CTTCTTACGT CGATGTCAAA 
CTATCCCGGA TTACGGTGAA AACCGTGCGG GTCAAACCGG TTCTTGTGGG CCGGCCGGCC 
CAGGGCTACT GGGTTGAAAA GGTACGCACG AATCCCGAGT CGATACAGGT CGAAGGGGCC 
GAAGATGAGC TTGATGCGCT GCAGCAGGTC GAAACCGCCC CGTTGAACAT CGAAAATGCA 
GGCAGTACCC TGGTTGAGGT GGTGCCGGTG GACTATCGCG GTAAATTTTC CCGGCTTAAG 
ACGCCTCAAA ATGTAGAGGT TGAAATCACA ATCGGGCAAC GTCCCGGTGA GTTATAA
 
Protein sequence
MFKLLTENWA LKLLSLVFAL ILWFFVMGER KLERSYAVPL EMKNMPEGMM VANDVPSVVE 
VRISGPRTLL VNLHSEDMRI LVDLKGLDVG LTSFKRLEER LNIPAPLKVT RLSPSYVDVK 
LSRITVKTVR VKPVLVGRPA QGYWVEKVRT NPESIQVEGA EDELDALQQV ETAPLNIENA 
GSTLVEVVPV DYRGKFSRLK TPQNVEVEIT IGQRPGEL