Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0997 |
Symbol | |
ID | 3723975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 1169733 |
End bp | 1171583 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637750589 |
Product | ATP-dependent zinc protease/ cell division protein |
Protein accession | YP_356418 |
Protein GI | 77918603 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000000353226 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAATCCGA TCTTTAAGAA TCTGGCTCTT TGGCTGGTCA TTTCCCTGGT CATGATTACC CTGTTTAATC TCATGACCAA TCGAAAAGAT GAGCCGAAAG CCATATCCTA TACGGCGTTT CTGGATGCCG TGGAAGAGGG TACCGTTCAG GAAGTCATGC TGGAAGGTTC CAATATCGAA GGCAAGGACC AGGATGGCGC GGCCTTCAAA ACCTTTGCGC CCAATGACCC GCGTCTGGTC GAGGTGTTGC GCACCAAGGG GGTTACCATC CAGGCCAAGC CCGAAGAGGA CCGCGGGTTC TGGATGACCA TGCTGTTTTA CTGGGGGCCG ATCATCCTGT TCATCGGTGT ATGGATCTTT TTTATCCGTC AGATGCAGTC CGGTAGCGGC AAGGCCATGA GTTTCGGCAA AAGTCGGGCC AGGCTGCTGT CCGAAAGCGG CAACCAGGTT ACCTTCAAGG ATGTTGCCGG TATCGACGAA GCCAAAGACG AACTGCAGGA GATCGTCGCC TTTCTCAAGG ACCCCAAGAA GTTTTCCCGA CTCGGCGGCC GCATCCCCAA AGGGGTGTTG CTGGTGGGCC CTCCCGGAAC CGGTAAAACT CTGCTCGGCC GTGCCATTGC GGGAGAGGCC GGGGTGCCGT TCTTTTCCAT ATCCGGCTCT GACTTTGTCG AGATGTTCGT CGGGGTCGGC GCCAGCCGGG TGCGCGATCT GTTCATGCAA GGCAAGAAGA ACGCGCCCTG CATCATCTTT ATCGACGAGA TCGATGCCGT GGGGCGCCAT CGCGGTGCCG GCCTGGGTGG CGGGCACGAC GAGCGGGAGC AGACCCTCAA CCAGTTGCTG GTGGAGATGG ACGGTTTCGA GTCCAACGAA GGGGTTATCC TGATCGCCGC AACCAACCGT CCCGATGTCC TCGATCCCGC CCTGCTGCGG CCGGGTCGTT TCGATCGGCA GGTGGTGGTG CCGCGTCCGG ATATCAAGGG CCGCGCCATG ATTCTGGATG TGCATGCCCG CAAGGTGCCT CTCGATGACG ATGTGAACCT TGACGTCGTG GCCAAGAGCA CGCCCGGTTT CTCCGGGGCG GATCTGGCCA ATCTTATCAA CGAAGCGGCC TTGCTGGCTG CCCGCCGTGA TAAGGAAAAA GTCGGCATGC AGGATCTGGA AGCCGCCAAG GACAAGGTGC TGATGGGAGC CGAACGTCGC TCCCTGGTGA TTACCGAGAA GGAAAAGCGG GTCACGGCTT ACCACGAGGC GGGACATGCG GTGGTGCCTT TGTTCCTGCC GGAGGCGGAT CCGGTGCACA AGGTTTCCAT TATTCCGCGC GGTCGGGCTC TTGGGGTGAC CATGTTCCTT CCCGAAGAGG AAAAATACAA CCAGTCCCGC GTTGGGCTGG AAACCGCCAT ATGCGGTCTG CTCGCCGGGC GTGTGGCCGA GGAGCTGGTG TTTGGTGAAA TGACCAGCGG TGCCAGCAAC GATATCGAGC GTGCCACCCA TATCGCGCGC AAAATGGTTT GCGAATGGGG GATGAGCGAC AAAATCGGTC CTCTGGCATT CGGCGAGAAG GAAGGCGAAG TTTTCCTTGG TCGCGACCTG GGTCATACGC GCAATTACAG CGAATCCACC GCCGTGGAGA TCGATACGGA AATCCGGCGT ATCGTGCAGC AGAGTTACGA TCATGCCCGC CAGATTCTCG AGGAAAACCG TGAGGGATTG GTGCGCGTCG CCGAAGCCCT GTTGGAGCGT GAAACCATCG ATGGCGAAGA AGTTCGCAGC ATGATTCTCG GCGAAGACGC CCAGGCGGAA CCTCAGAGTG AAAACGAATC GGCAGACGAT GCGCCGACCG TTGAGGTATA A
|
Protein sequence | MNPIFKNLAL WLVISLVMIT LFNLMTNRKD EPKAISYTAF LDAVEEGTVQ EVMLEGSNIE GKDQDGAAFK TFAPNDPRLV EVLRTKGVTI QAKPEEDRGF WMTMLFYWGP IILFIGVWIF FIRQMQSGSG KAMSFGKSRA RLLSESGNQV TFKDVAGIDE AKDELQEIVA FLKDPKKFSR LGGRIPKGVL LVGPPGTGKT LLGRAIAGEA GVPFFSISGS DFVEMFVGVG ASRVRDLFMQ GKKNAPCIIF IDEIDAVGRH RGAGLGGGHD EREQTLNQLL VEMDGFESNE GVILIAATNR PDVLDPALLR PGRFDRQVVV PRPDIKGRAM ILDVHARKVP LDDDVNLDVV AKSTPGFSGA DLANLINEAA LLAARRDKEK VGMQDLEAAK DKVLMGAERR SLVITEKEKR VTAYHEAGHA VVPLFLPEAD PVHKVSIIPR GRALGVTMFL PEEEKYNQSR VGLETAICGL LAGRVAEELV FGEMTSGASN DIERATHIAR KMVCEWGMSD KIGPLAFGEK EGEVFLGRDL GHTRNYSEST AVEIDTEIRR IVQQSYDHAR QILEENREGL VRVAEALLER ETIDGEEVRS MILGEDAQAE PQSENESADD APTVEV
|
| |